Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq162 1557 0.0 >seq162 Length=4011 Score = 1557 bits (1726), Expect = 0.0 Identities = 2208/3078 (72%), Gaps = 66/3078 (2%) Strand=Plus/Minus Query 608 CGACCCCTTAAAGATATCCGCGCCGATTACAACTATGCAAAGGCTAAGGGTGTTAAAGAT 667 || || ||||| ||||| |||| || || || || | || || ||| |||| ||| Sbjct 4005 CGCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGAT 3946 Query 668 GAGTGCTCAAAAATCTTGGAGGAGTCAACTATGAAGTCTCGACGTGGCTTTACCGTTCAA 727 ||||| |||| | | |||||| || |||||||| || || | |||||| | |||| Sbjct 3945 GAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAG 3886 Query 728 AGATTAATGAATGCTATGCGTACTGCCCATTCTAAGGGCTGGTATGTCGTATTCGATACT 787 | || |||||||| ||||| || ||| || | || |||| | |||| || || ||| Sbjct 3885 CGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT 3826 Query 788 CTTACTCTAGCCGATGACCGCTTAAAGGATTTCTATGATAATCCCAATGCTCTTCGTGAC 847 || || | || || ||||| ||| ||| || |||||||||||||||||| | |||||| Sbjct 3825 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGAC 3766 Query 848 TACTTCCGTGATATTGGTCGTATGGTGCTTACTGCCGAAGGTCGCTCGGTGCATGACTCA 907 || || |||||||||||||||||||| ||| ||||||| |||||| || |||| ||| Sbjct 3765 TATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCA 3706 Query 908 TCTTCCGACTGCTATCAGTATTTTTGTGTGCCAGAGTATGGTACACAGCACGGTCGTCTA 967 |||||||||||||||||||||||||||| |||||||||||| | || ||||| Sbjct 3705 CACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTT 3646 Query 968 CATTTCCACGCAGTGCATCTTATGCGCACACTTCCTCTGGGTTCTCTGCACCCTAACTTC 1027 |||||||| || ||||| ||||||| ||||||||| ||| | ||||||| || Sbjct 3645 CATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTT 3586 Query 1028 GGTAAGCTGGTACGCATCAATCGGCAAATAAATAGCTTGCAAAACACGTGGCCTTATGGT 1087 ||| | |||||||| || || |||||||||||||||| ||||||||||||||| Sbjct 3585 GGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGT 3526 Query 1088 TACTCTATGCCCATCGCAGTCCGGTACTCCCAAGACGCATTCTCTCGCGCTGGCTGGCTC 1147 ||| ||||||||||||||| || ||| | || ||||| || || || |||| ||| | Sbjct 3525 TACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTG 3466 Query 1148 TGGCCTGTGGACTCAAAGGGTGAACCCCTTAAAGCTACCTCGTATATGGCTGTAGGCTTC 1207 |||||||| || | || ||||| || |||||||||||| ||||||||||| || ||| Sbjct 3465 TGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTC 3406 Query 1208 TACGTTGCTAAATACGTTAACAAAAAATCAGATATTGACATGGCCGTAAAAGGCCTAGGG 1267 || || |||||||||||||||||||| |||||||| ||| | || | ||||| ||||| Sbjct 3405 TATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGA 3346 Query 1268 AATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTCATACCCAAGAAAGTGTTC 1327 ||||||||||||||| ||||| |||||||| | || | |||||||| ||||| Sbjct 3345 GCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTC 3286 Query 1328 AGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATGGCTCACCTGTCAGCG 1387 ||||| ||||| ||||| ||||| |||||| || | ||||| | | ||||| || Sbjct 3285 AGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTGTCCACG 3226 Query 1388 GAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCGTTCAACAACATCTTG 1447 || | | || |||| ||| | |||||||||||| ||| ||||||||| | || ||| Sbjct 3225 GAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTG 3166 Query 1448 AAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAATCTGTCGCCGACGTT 1507 ||||||||||| || | |||| | | || |||||||| ||| |||| ||||||||| Sbjct 3165 AAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTT 3106 Query 1508 TTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGCAATTTGACCCGAACA 1567 |||| |||||||||||||||||| |||||||| ||||| |||||| || || || Sbjct 3105 TTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATG 3046 Query 1568 ATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACGAAATTAACAAGTACG 1627 || || | |||||||| ||||||||||||||||| ||||| ||| |||||| | || Sbjct 3045 ATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCG 2986 Query 1628 GATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATTGCTGTTGCTAACTTA 1687 |||||||||||||| | ||||| || ||| | ||||||||| || |||| ||| Sbjct 2985 GATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTA 2926 Query 1688 CGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCAATCTCAACTTAAAAA 1747 |||||||||||||||||||||||||| |||||||||| |||||| | || ||| | Sbjct 2925 CGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCA 2866 Query 1748 ACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG-TGCTGGCAAAAACT 1806 |||||| ||||||||||| |||||||||||||| || |||| | ||| |||||||| Sbjct 2865 GCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACGATTCTGTCAAAAACT 2807 Query 1807 GACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTCCTCAAGGACTGGTTC 1866 ||||| | || |||||||| | | |||||| | || | || ||||||||||||| Sbjct 2806 GACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTT 2747 Query 1867 CGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGACATACTGAAAGAACGT 1926 | || || |||||| || ||||||| | | || | ||||||| | ||||| ||| Sbjct 2746 AGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGT 2687 Query 1927 GGCCTATTATCCACATCGTCAACTGACACAAACCAC--AAAGGAAACTGAAATGTCTAAA 1984 || || |||| || ||| |||||| | ||| || ||||| | | Sbjct 2686 GGATTACTATCTGAGTCCGATGCTG--TTCAACCACTAATAGGTAA--GAAAT-CATGAG 2632 Query 1985 TCAA---AC-GAATCTGCTGTAGCCTTTCAAACTGCTATCGCTTCTATCAAACTTATTCA 2040 |||| || ||| | ||| || || || ||| | || ||||| || || ||||| Sbjct 2631 TCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCATTCA 2572 Query 2041 AGCATCTTCTGTTCTTGACTTGACAGAGGACGATTTTGACTTCTTAACTCGCGACCGTGT 2100 || ||| | ||| | || || || || || ||||| || || | || | || || Sbjct 2571 GGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGT 2512 Query 2101 CTGGATTGCTACCGACCGTTCACGCGCTCGCCG-TGCTATCGAGGCTTGCGTATATGGAA 2159 ||||||||||| ||||| || || ||||| || ||| | ||||||||||| ||||| | Sbjct 2511 TTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGC-GTTGAGGCTTGCGTTTATGGTA 2453 Query 2160 CACTGGACTTTGTCGGGTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCA 2219 | ||||||||||| || || |||||||||||||||||||||||||||||| ||||||||| Sbjct 2452 CGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCA 2393 Query 2220 TTGCTTATTACGTTCATCCCGTTAACATCCAAACCGCCTGTCTCATCATGGAAGGTGCTG 2279 |||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |||| Sbjct 2392 TTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTG 2333 Query 2280 AGTTTACCGAAAACATCGTCAATGGTGTTGAACGCCCCGTTAAAGCCTCTGAACTGTTCG 2339 | ||||| |||||||| | ||||| || || || || ||||||||| ||||| |||||| Sbjct 2332 AATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCG 2273 Query 2340 CCTTCACTCTTCTTGTTCGCGCCGGAAACAAAGATCTTATCGGTCACGCTGAAACAAACA 2399 | || || | | ||| ||||| ||||||| || || | | |||| ||| |||| Sbjct 2272 CGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACG 2213 Query 2400 TCCGTGAACAGTTACGCGCTCAAGGTGTCATGTAAAGACCTTTGATTTTATCGTCTTCAC 2459 | ||| || | ||||| || |||| || |||||| | | | | || | Sbjct 2212 TGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATG--------TCTAAAGGTAAAAAA 2161 Query 2460 TTTTAAGGAGTT----ATGTAATGAAAAAATCAATTCGCCGCTCTGGTGGCAAATCTAAG 2515 || || | | || | | | || | || ||||| ||| Sbjct 2160 CGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAA 2101 Query 2516 GGTGCCCGTCTCTGGTATGTAGGCGGAACACAATACTAATCTTTTATGTGGGACCGCGGT 2575 || || ||||| ||||||||||| || ||||| ||| || | ||| | ||| Sbjct 2100 GGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA--TTGCA---GGGGCTTCGGC 2046 Query 2576 CCCACTCTATTTAAGGATACAAAAATGTCTAACGTTCAAACATCTGCGGACCGTGTACCT 2635 ||| || || |||||| || |||||||| ||||||| || || ||| | || Sbjct 2045 CCC---TTACTTGAGGATA-AATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCG 1990 Query 2636 CATGACTTATCTCACCTTGTCTTTGAGGCTGGTAAAATTGGCCGCCTCAAAACTATCTCT 2695 |||||| | || || |||| ||| |||||| | ||||| || || | || || || Sbjct 1989 CATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCA 1930 Query 2696 TGGACGCCTGGTGGTGCTGGTGACTCTTTCGAGTGTGATATGGTTGGCGCTATTCGTCTG 2755 || || | | ||||| ||||| |||||| || ||||||||| | ||||| Sbjct 1929 ACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTT 1870 Query 2756 TCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCACGCGTTGATATCTTTCCTTTCTATATC 2815 || || | ||||||||||| ||| ||||||| || || || ||| |||| ||| || Sbjct 1869 TCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTC 1810 Query 2816 CCACACCGTCATATCTACGGTCAGCAGTGGATTAACTTTATGAAGGATGGCGTTAATGCC 2875 || || ||||| | || ||| | ||||||||||| || ||||||||||| ||||||||| Sbjct 1809 CCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCC 1750 Query 2876 TCCCCTCTTCCTCCTGTTACATGCTCCTCTGGTT---GGGACTCTGCTGCTTATCTCGGT 2932 | ||||| || |||||| | | |||||| ||| ||| |||| ||| || Sbjct 1749 ACTCCTCTCCCGACTGTTA---ACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGC 1693 Query 2933 ACCATTCCGTCTTCTACCCTTAAAGTGCCTAAATTCTTACATCAGGGCTATCTGAATATT 2992 || ||| || |||| |||| | ||||| || |||||| ||| ||||||| Sbjct 1692 ACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATC 1633 Query 2993 TATAATAACTACTTCAAACCGCCTTGGTCTGATGACTTAACTTAC----GCTAACCCATC 3048 ||||| ||||| || ||| |||| || |||| || | | ||| ||||||| | Sbjct 1632 TATAACAACTATTTTAAAGCGCCGTG----GATGCCTGACCGTACCGAGGCTAACC---C 1580 Query 3049 CAATATGCCT--TC-TGAGGATTATAAATGGGGCGTACGTGTCGCTAACCTTAAATCTAT 3105 ||| || | || || ||| | | || | ||| | | || ||| || Sbjct 1579 TAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACAT 1520 Query 3106 CTGGACTGCGCCACTTCCACCGGATACTCGTACATCTGAAAACATGACTACTGGTACATC 3165 |||||||| || ||||| || || ||| ||| | ||||| ||| ||| | Sbjct 1519 TTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCAC 1460 Query 3166 CACTATTGACATTATGGGCCTTCAAGCCGCATACGCTAAATTACATACGGAACAGGAACG 3225 |||||||||||||||| || ||||| || || ||||| || ||||| || || ||||| Sbjct 1459 ATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACG 1400 Query 3226 TGATTACTTCATGACCCGTTACCGTGACATTATGAAAGAGTTCGGCGGTCATACATCCTA 3285 ||||||||||||| ||||||| ||| |||| || || ||| | || || || Sbjct 1399 TGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTA 1340 Query 3286 TGATGGTGACAATCGTCCTCTTCTGCTCATGCGCTCTGAATTTTGGGCATCTGGCTATGA 3345 ||| | |||||| |||||| | || ||||||||||| | | ||||||||||||||||| Sbjct 1339 TGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGA 1280 Query 3346 CGTAGACGGTACTGACCAATCTTCTCTCGGTCAATTCTCTGGTCGCGTTCAGCAGACCTT 3405 || || || ||||||||| | || | || || || |||||||| ||||| ||||||| Sbjct 1279 TGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTA 1220 Query 3406 CAATCACAAAGTCCCACGCTTCTATGTTCCTGAGCATCGCGTAATTATGACTCTGGCGGT 3465 || || || || || |||| ||||||||||||| || || | ||||| ||| | Sbjct 1219 TAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCT 1160 Query 3466 TACTCGCTTTCCGCCTACT--CATGAAATGGAAATGCACTATCTTGTAGGTAAAGAAAAC 3523 | ||| |||||||||||| | ||| || || || || ||| | ||||| Sbjct 1159 TGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCT 1102 Query 3524 TTAACTTATACCGATATTGCTTGTGACCCTGCACTG-ATGGCTAACCTGCCACCTCGTGA 3582 || |||||||||||||||||| | ||||||| || ||||| ||| |||| || ||||| Sbjct 1101 TTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGA 1043 Query 3583 AGTATCCTTAAAAGAATTCTTCC--ACTCCTCACCCGATTCTGCTAAATTCAAAATCGCT 3640 | | || | || || | |||| || | | || ||| || || || || ||| Sbjct 1042 AATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCG--TCTAAGAAGTTTAAGATTGCT 985 Query 3641 GAGGGCCAATGGTATCGT 3658 ||||| || ||||||||| Sbjct 984 GAGGGTCAGTGGTATCGT 967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734265384820