Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq162 975 0.0 >seq162 Length=4011 Score = 975 bits (1080), Expect = 0.0 Identities = 1335/1851 (72%), Gaps = 74/1851 (4%) Strand=Plus/Minus Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640 |||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | | Sbjct 2575 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 2516 Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700 || |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| Sbjct 2515 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 2456 Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760 | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2455 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2396 Query 2761 TCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGGCG 2820 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 2395 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCG 2336 Query 2821 CTGAGTTTACGGAAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCTCT 2880 |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | | Sbjct 2335 CTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGT 2276 Query 2881 TCGCGTACACCTTGCGTGTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAGAG 2939 |||||| ||||||||||| || ||| || || || |||| ||| ||||| Sbjct 2275 TCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAGAA 2217 Query 2940 AATGCTCGTCAGAAACTTCGTGCA-----AGTGGAGTAATGT---AATATGAAGAAAGCT 2991 || | ||||| ||| | |||||| |||| ||||||| || | || || | | Sbjct 2216 AACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTT 2157 Query 2992 C-GTCGTTC-CCCTTCTCGT----------------------AAG--------AAAGGCG 3019 | | || || |||| |||| ||| ||||||| Sbjct 2156 CTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCG 2097 Query 3020 CTCGTCTCTGGTATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCT---AT 3076 ||||||| ||||||||||| ||| ||||||||||| ||||||||||||||| | Sbjct 2096 CTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTT 2037 Query 3077 AAGGATTCTTAAATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTTCT 3136 ||||| | ||||| || | |||||| ||| || ||||| || || |||||||| Sbjct 2036 GAGGATAAAT-TATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCC 1978 Query 3137 CATCTGGTTTTTGATGCAGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTGTT 3196 ||||| | || ||| || | ||||||||| | | |||| ||||| ||| Sbjct 1977 CATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTT 1918 Query 3197 GTTGCAGGTGATTCTTTTGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTCGT 3256 | || || || || || ||| | || |||||||| | || ||||| || | ||| Sbjct 1917 ATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGT 1858 Query 3257 CGTGGCCTTGCTGTTGACTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCAT 3316 |||||||||||| |||||||| ||| ||| | || || |||||||||||||||||||| Sbjct 1857 CGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC 1798 Query 3317 GTATATGGTGAGCAGTGGATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCC 3376 || |||||||| ||||||||| | || |||||| | |||||| |||| ||||| | | Sbjct 1797 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCG 1738 Query 3377 CCTGTTCAGTGCTCTCGCGGTTGGGATAGTGCTCA------GTATCTTGCTACTATTCCG 3430 ||||| | | || |||| ||| || || | ||||| || ||| Sbjct 1737 ACTGTTAA---CACTACTGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAAC 1684 Query 3431 TCTAGTAACTTAAAGGTTCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATA 3488 || || | || | |||||| ||| || ||| ||||| |||| || || || | Sbjct 1683 CCTGATACCAATAAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACA 1626 Query 3489 ATTACTTTAAAGCTCCGTGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGG 3548 | || |||||||| ||||||||| ||||| || | || ||||| | | | | Sbjct 1625 ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATC 1566 Query 3549 GTGAAGATGTTCGTTTTGGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGC 3608 || |||| ||||| |||| | ||| || | | |||| |||||||||||||||| Sbjct 1565 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGC 1506 Query 3609 TTCCTCCGGATACTGAAACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTA 3668 ||||||| || ||||| |||| ||| |||| |||| || |||||||||| Sbjct 1505 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTA 1446 Query 3669 TGGGTTTGCAGGCCGCTTATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGA 3728 ||||| |||| || ||||||||| | || |||||||| || || ||||||||||||||| Sbjct 1445 TGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGC 1386 Query 3729 CTCGTTATCGTGATATTGTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATC 3788 ||||| | |||| || || ||||||||||| || |||||||| || || || | Sbjct 1385 AGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACC 1326 Query 3789 GTCCTTTGCTTGTTATGCATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCG 3848 ||||||| ||||| |||| ||| | ||||||| || |||||||||||||| || || | Sbjct 1325 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTG 1266 Query 3849 ACCAAAGCTCTCTCGGTCAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTAC 3908 |||||| || | || ||||| || |||||||| || ||||| | ||| ||||| || | Sbjct 1265 ACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC 1206 Query 3909 CGCGATTCTTCTGCCCTGAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGC 3968 |||| ||||| |||||||||||||||||||| || || || | || || || |||| Sbjct 1205 CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGC 1146 Query 3969 CGACT--CATGAAATGGAGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGA 4026 | ||| | ||| ||||| || ||| | | ||||| | |||||||||||| || Sbjct 1145 CTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGA 1088 Query 4027 TTTGGCTTGTGACCCTGCTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTC 4085 | | ||| | ||||||| |||| ||||| |||||||| || ||||| || |||| Sbjct 1087 TATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGG 1029 Query 4086 AGTTCTTCCATTCTGGAAGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATC 4145 | | |||| |||||| | | | ||||||||||| ||||| ||||||||||||| Sbjct 1028 ATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATC 969 Query 4146 G-CATGCAGCCTGATCG--CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCT 4202 | |||| |||| ||| ||| | | ||| || |||||| || || || ||| Sbjct 968 GTTATGC-GCCT--TCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCA 912 Query 4203 ATAGCGCGATTCCGTCTGATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACG 4262 | | || |||| |||| | | | ||||| || || || | || | Sbjct 911 TTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATG 852 Query 4263 ATGAGGTTTTCCAGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCA 4322 | || ||||||||| | ||| | ||| ||||||| ||| ||| |||||| | Sbjct 851 ACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGA 792 Query 4323 CCATTTATCGTAATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373 || ||||||| ||| |||||||||||||||| || || ||||| || |||| Sbjct 791 CCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 741 Score = 165 bits (182), Expect = 3e-37 Identities = 278/398 (70%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352 || |||||| |||| ||||| || | || | ||||| || || || |||| ||| || Sbjct 3849 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 3790 Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412 || || ||||||||| | ||||| ||||| | | ||||||| ||||| || Sbjct 3789 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 3730 Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472 || ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| ||| Sbjct 3729 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 3670 Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530 | ||| |||| | || |||||||||| |||| ||||| | ||||||| |||| Sbjct 3669 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 3612 Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590 || || || ||||||||||| ||||| |||||| ||| |||||| |||| | Sbjct 3611 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 3553 Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649 | || | | |||||||||||| | || || || || || ||||| || Sbjct 3552 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 3493 Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687 || |||| ||| || |||||||||||||||||||| Sbjct 3492 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 3455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19302249296512