Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20seriata_20[genbank_20GCA_5F001006355.1_202015-05-13] 694 sequences; 37,120,944 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq162 1815 0.0 >seq162 Length=4011 Score = 1815 bits (2012), Expect = 0.0 Identities = 2458/3395 (72%), Gaps = 127/3395 (4%) Strand=Plus/Minus Query 659 AAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCACCATGAAATCCCGCCGT 718 || |||| ||| |||||||| || | | | || |||| ||||| |||||||| || | Sbjct 3960 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 3901 Query 719 GGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCACACTGATGGCTGGTAT 778 |||||| | ||||| | ||||||||||| ||||| || || ||||||| |||| | Sbjct 3900 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 3841 Query 779 GTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGGACTTCTATGCTAACCC 837 | || || || |||||||| || ||||| || || |||| ||| || |||| ||| || Sbjct 3840 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGGCGTTTTATGATAATCC 3782 Query 838 CAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGTCG 897 ||||||| | ||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 3781 CAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG 3722 Query 898 TTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTGTGCCTGAGTATGGCAC 957 || |||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct 3721 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC 3662 Query 958 CCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCGCACACTTCCTTTGGGT 1015 ||| |||||||| | || || || || ||||| ||||||| ||||||||| ||| Sbjct 3661 --AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGT 3604 Query 1016 TCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAA 1075 | |||||||| |||||| | ||| || | | || || |||||||||||||| Sbjct 3603 AGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAA 3544 Query 1076 AACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTATTCTCAGGATGCTTTC 1135 || || ||||||||||||||| ||||||||||||||| || || | ||||| ||||| Sbjct 3543 AATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTT 3484 Query 1136 TCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACCCCTTAAATCCACCTCG 1195 || || |||| ||| | |||||||| ||| | || ||||| || |||||| | ||| Sbjct 3483 TCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGT 3424 Query 1196 TATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAAATCTGATGTTGACATA 1255 ||||||||||| || ||||| || |||||||||||||| ||||| || ||| | ||| | Sbjct 3423 TATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTT 3364 Query 1256 GCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAAAACGCAGATGGCTCTT 1315 || || ||||| |||| | || |||||||| || ||||||| || || | || Sbjct 3363 GCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTA 3304 Query 1316 TTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGGGATGAAACTACTCCCA 1375 | || ||||| || || |||| |||||||||||||||||||||||||| | ||| || Sbjct 3303 CTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACA 3244 Query 1376 ATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGTGGGTTACGACGTGACC 1435 ||||| | ||| || ||||||| ||||||||||| ||| | |||||||||||| ||| Sbjct 3243 ATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACG 3184 Query 1436 CCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAG 1495 ||||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 3183 CCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAA 3124 Query 1496 CAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATG 1555 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||| Sbjct 3123 GTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATG 3064 Query 1556 CGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTTTATCGCTTCAATGACG 1615 ||| || || || || || | |||| ||| ||||||||||||||||| |||||| Sbjct 3063 CGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACG 3004 Query 1616 CAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTACGTTACTAATGCAGGA 1675 ||||| ||| || | |||||||||||||||| | ||||| || || ||| |||||| Sbjct 3003 CAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGA 2944 Query 1676 ATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAACT 1735 ||| || |||| |||||| |||||||||||||||||||||| ||||||||| || | Sbjct 2943 ATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAAT 2884 Query 1736 TCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACCTTTCGCCATCATCTCA 1795 || | || ||| | |||||| |||||||| || |||||||||||||| || | Sbjct 2883 TCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-A 2825 Query 1796 ACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCTCAATATGATGGGCGCT 1854 ||| | | |||| ||||||||| | ||||| || || ||||| |||||| | ||| | Sbjct 2824 ACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACG 2765 Query 1855 CTTCTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGGCAAAGAATCAATGCTT 1914 | | ||||||||||| | ||||| |||||| || ||||| | ||| || | || Sbjct 2764 TTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT 2705 Query 1915 GACATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG--GCTTAAC--TTACAA 1970 |||||| |||| || ||||| || ||| | | | ||| | | ||| || | Sbjct 2704 GACATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGCTGTTCAACCACTAATA 2648 Query 1971 AGGAATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTTCAAACCGCTATTGCCT 2027 | || || |||| ||| | ||| | | ||| || || |||||| | |||| Sbjct 2647 GGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCT 2588 Query 2028 CCATCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAGGACGATTTCGAATTCT 2087 | || || || |||||||| ||| | ||| | || | || || || |||||||| || Sbjct 2587 CTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTC 2528 Query 2088 TAACTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGG 2147 | || || || || |||||||| ||||||||||| |||||||| ||| |||||| Sbjct 2527 TGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGG 2468 Query 2148 CTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGT 2207 ||||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 2467 CTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGT 2408 Query 2208 TTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATTCAAACGGCATGTCTTA 2267 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct 2407 TTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCA 2348 Query 2268 TTATGGAAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTCGATGCCCCGGTTAAAG 2327 | ||||||||||||||||| || |||||||| |||||||| ||||| |||||||||| Sbjct 2347 TCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAG 2288 Query 2328 CCGCTGAACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAACACTGAGCTTATTACTT 2387 |||||||| | |||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct 2287 CCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTG 2228 Query 2388 ACGCAGAAAACAATGCGCGTGAAAAACTGCGCGCTCAAGGAGTGATG-GATGTC------ 2440 |||||||| | || | |||| ||||| | || || ||||||||||| ||||| Sbjct 2227 ACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGG 2168 Query 2441 TAAAAAATCTATTCGC---CGCTCTGGT---------------------------GGCAA 2470 ||||||| | | || ||| ||||| ||||| Sbjct 2167 TAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAA 2108 Query 2471 ATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTCTAAGGGGCTT 2530 |||||| ||||| || |||||||| || || |||||| |||| | |||||||| Sbjct 2107 GCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGC--AGGGGCTT 2050 Query 2531 CGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTTCCGCTGAACGTATTCC 2590 |||||||| || || |||||| | |||||||| | |||||| ||| || ||||| || Sbjct 2049 CGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCC 1991 Query 2591 GCATGACCTCTCACATCTGGTATTCGAAGCTGGTAAAATCGGACGCCTTAAAACTATCTC 2650 ||||||||| || ||||| | ||| |||||| | || || || |||| || || || Sbjct 1990 GCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTC 1931 Query 2651 CTGGACTCCTGTTGTCGCTGGTGATTCTTACGAAACTGAAATGGTAGGCGCTATTCGTCT 2710 ||||| ||| ||||||| || || | ||| | || || |||||| | ||||| Sbjct 1930 AACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCT 1871 Query 2711 TTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTCTCGCGTCGACGTCTTTACTTTCTATAT 2770 |||||| | |||||||| || ||| | |||||| || ||| | |||||||| ||| | Sbjct 1870 TTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGT 1811 Query 2771 CCCTCATCGTCATGTCTATGGTCAACAATGGATTGACTTTATGAAGACTGGCGTTAACGC 2830 |||||||||||| || |||||| |||| |||||| | || |||||| ||| ||||| || Sbjct 1810 CCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGC 1751 Query 2831 TACTCCTCTGGC-TCCGGTAACTTGTTCCTCTGGCT---GGGATTCTGCTGCCTATCTTG 2886 |||||||| | | | |||| | |||| | || ||| || | ||||| Sbjct 1750 CACTCCTCTCCCGACTGTTAAC----ACTACTGGTTATATTGACCATGCCGCTTTTCTTG 1695 Query 2887 GCAC---TATCCCGTCAACTAATTTGAAGGTTCCTAA--ATTCCTTCATCAATCTTATCT 2941 |||| || ||| || ||| || | ||||| ||| || ||| |||| | Sbjct 1694 GCACGATTAACCCTGATACCAAT---AAAATCCCTAAGCATTTGTT--TCAGGGTTATTT 1640 Query 2942 CAATATTTACAACAACTACTTTAAGCCGCCGTGGTCTAATGACCTCACCTATGCTAACCC 3001 ||||| || |||||||| ||||| |||||||| ||||| ||| | ||||||| Sbjct 1639 GAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACC- 1581 Query 3002 ATCTAATATGCCCGCTGAGGAT--TACAAATGGGGCGTTC--GTGTCGCTAACTTAAAAT 3057 ||||| || | | ||| | | | | ||| || || | || |||| Sbjct 1580 --CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAA 1523 Query 3058 CTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC-TAAGCAGGATATGACTACTGGC 3116 | || ||||| || || ||||||||||| | | | | | | | ||||| ||| Sbjct 1522 C-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGCTTTCTCGCCAAATGACGACT--- 1468 Query 3117 GCTACCA---CTATCGATATTATGGGCCTACAAGCTGCCTATGCTAAACTCCACACTGAA 3173 |||||| |||| || |||||||| || |||||||| |||||||| | || ||||| Sbjct 1467 TCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGAC 1408 Query 3174 CAGGAACGTGACTATTTCATGACTCGCTACCGCGATATTATGAAAGACTTTGGCGGTCAC 3233 || |||||||| || |||||| || |||| ||| |||| ||||| ||| | Sbjct 1407 CAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAA 1348 Query 3234 ACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATGCGCTCTGAATTTTGGGCCTCT 3293 ||||| || |||| ||| ||||||||| | || | ||||||||| | | ||||| ||| Sbjct 1347 ACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCT 1288 Query 3294 GGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGTCAGTTCTCTGGTCGCGTCCAA 3353 |||||||| || || || ||||||||||| || || || ||||| |||||||| || ||| Sbjct 1287 GGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAA 1228 Query 3354 CAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCTGAGCATGGCGTAATTATGACT 3413 || |||| ||| ||| ||||| || |||| |||||||||||||||| || | ||| Sbjct 1227 CAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACT 1168 Query 3414 TTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGGAAATGCACTATCTCGTCGGTA 3471 | | || ||| || || |||||| || ||| || || || || || || || Sbjct 1167 CTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTA 1110 Query 3472 AGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTGCTCT-TATGGCTAACCTGCCT 3530 | | || |||||||||| || ||||| | ||||||| | | |||||| ||| |||| Sbjct 1109 AAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCG 1051 Query 3531 CCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCTGGT---ACTGGTAAATTCAAA 3587 |||||||||||| | || || | || | |||| || | || || || || Sbjct 1050 CCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAG 991 Query 3588 ATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGCGTTGCCTTCC--CTTATAACG 3645 ||||| || ||||| ||||||||| | |||| ||| | ||| ||||| || Sbjct 990 ATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTC--TCCTGCTTATCACC 933 Query 3646 CTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGTCTAATGATATTCTCGAACGTGTA 3704 |||||| |||||||| ||| |||| |||| ||| ||| |||| | | ||||| ||| Sbjct 932 TTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTA 874 Query 3705 CTTGTTCGAACTGATAACTATGATGAAATCTTCCAGTCTATGCAACTTGCACACTGGAAC 3764 ||| |||| || | ||||| | |||||||| | || | || ||||| Sbjct 873 CTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAAT 814 Query 3765 ATGCAAACTAAATTTAACACTACTGTATATCGTCATATGCCTACCACTCGTGATGGCATC 3824 | || ||||||||| || || ||||| || |||| |||||||| ||| ||| Sbjct 813 AGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATC 754 Query 3825 ATGA---CGTCATAAAA---------------CAAAACGTTGAACGGGTACAAATTTTAA 3866 |||| ||| |||||| | |||| ||| |||| ||||||||| Sbjct 753 ATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGGTAAAAATTTTAA 694 Query 3867 TTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTTAGCTAACTTACTTAAGGAAATT- 3925 ||| |||| | |||||| ||||||||||||| ||| | | ||| |||| || Sbjct 693 TTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTT-AGGAGTTTA 635 Query 3926 CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 |||||||||| |||| | | ||| |||||||| Sbjct 634 ATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443067595210