Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphoma_20sp._20B47-9_20[genbank_20GCA_5F001748405.1_202016-08-29] 576 sequences; 38,548,368 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq392 214 6e-52 >seq392 Length=188168 Score = 214 bits (236), Expect = 6e-52 Identities = 163/193 (84%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 4409 CCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGA 4468 ||||||||| || | ||||| || | | ||||||||||| ||| || | ||| |||| Sbjct 181300 CCCTCTTAACGACAATCGCGCTGCCTCTCATTACCCCAAACAGACAGCACTGAAGCATGA 181241 Query 4469 GTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGCG 4528 || | | || ||| |||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct 181240 GTTGTGATCATGGCTTGAGGCCTCAACTATGAAATCACGTCGAGACTTTGCTATTCAGCG 181181 Query 4529 TTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCT 4588 ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| Sbjct 181180 TTTGATGAATGCAATGCTACAGGCTCATGTTGATGGATGGTTTATCGTTTTTGACACTCT 181121 Query 4589 CACGTTGGCTGAC 4601 ||||||| ||||| Sbjct 181120 CACGTTGTCTGAC 181108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17123092123840