Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_001420.2
Length=5577
Score E
Sequences producing significant alignments: (Bits) Value
seq4 356 8e-95
seq2 93.3 1e-15
>seq4
Length=502
Score = 356 bits (394), Expect = 8e-95
Identities = 377/497 (76%), Gaps = 0/497 (0%)
Strand=Plus/Minus
Query 611 CCCCTTAAAGATATCCGCGCCGATTACAACTATGCAAAGGCTAAGGGTGTTAAAGATGAG 670
|| ||||| ||||| |||| || || || || | || || ||| |||| ||||||
Sbjct 500 CCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG 441
Query 671 TGCTCAAAAATCTTGGAGGAGTCAACTATGAAGTCTCGACGTGGCTTTACCGTTCAAAGA 730
|| |||| | | |||||| || |||||||| || || | |||||| | |||| |
Sbjct 440 TGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGCGT 381
Query 731 TTAATGAATGCTATGCGTACTGCCCATTCTAAGGGCTGGTATGTCGTATTCGATACTCTT 790
|| |||||||| ||||| || ||| || | || |||| | |||| || || |||||
Sbjct 380 TTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTC 321
Query 791 ACTCTAGCCGATGACCGCTTAAAGGATTTCTATGATAATCCCAATGCTCTTCGTGACTAC 850
|| | || || ||||| ||| ||| || |||||||||||||||||| | ||||||||
Sbjct 320 ACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACTAT 261
Query 851 TTCCGTGATATTGGTCGTATGGTGCTTACTGCCGAAGGTCGCTCGGTGCATGACTCATCT 910
|| |||||||||||||||||||| ||| ||||||| |||||| || |||| |||
Sbjct 260 TTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACAC 201
Query 911 TCCGACTGCTATCAGTATTTTTGTGTGCCAGAGTATGGTACACAGCACGGTCGTCTACAT 970
|||||||||||||||||||||||||||| |||||||||||| | || ||||| |||
Sbjct 200 GCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTCAT 141
Query 971 TTCCACGCAGTGCATCTTATGCGCACACTTCCTCTGGGTTCTCTGCACCCTAACTTCGGT 1030
||||| || ||||| ||||||| ||||||||| ||| | ||||||| || |||
Sbjct 140 TTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGT 81
Query 1031 AAGCTGGTACGCATCAATCGGCAAATAAATAGCTTGCAAAACACGTGGCCTTATGGTTAC 1090
| |||||||| || || |||||||||||||||| ||||||||||||||||||
Sbjct 80 CGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTAC 21
Query 1091 TCTATGCCCATCGCAGT 1107
|||||||||||||||
Sbjct 20 AGTATGCCCATCGCAGT 4
>seq2
Length=506
Score = 93.3 bits (102), Expect = 1e-15
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 4870 AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACTATCTCGCCGCCGCATTCCCCGAG 4929
||||||||| |||| || || ||||| || || ||||| || || ||||| || |||
Sbjct 340 AAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAG 281
Query 4930 CTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTAGTCCAGGCATGCAAGACGCTGGC 4989
|| || | ||||| ||||||||||||| ||||| | | || ||| ||||| ||
Sbjct 280 CTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGA 221
Query 4990 TTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTGAC 5028
|| | ||||| || ||||| || || ||||| || |||
Sbjct 220 TTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17734161222930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |