Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq4 356 8e-95 seq2 93.3 1e-15 >seq4 Length=502 Score = 356 bits (394), Expect = 8e-95 Identities = 377/497 (76%), Gaps = 0/497 (0%) Strand=Plus/Minus Query 611 CCCCTTAAAGATATCCGCGCCGATTACAACTATGCAAAGGCTAAGGGTGTTAAAGATGAG 670 || ||||| ||||| |||| || || || || | || || ||| |||| |||||| Sbjct 500 CCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGAG 441 Query 671 TGCTCAAAAATCTTGGAGGAGTCAACTATGAAGTCTCGACGTGGCTTTACCGTTCAAAGA 730 || |||| | | |||||| || |||||||| || || | |||||| | |||| | Sbjct 440 TGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGCGT 381 Query 731 TTAATGAATGCTATGCGTACTGCCCATTCTAAGGGCTGGTATGTCGTATTCGATACTCTT 790 || |||||||| ||||| || ||| || | || |||| | |||| || || ||||| Sbjct 380 TTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTC 321 Query 791 ACTCTAGCCGATGACCGCTTAAAGGATTTCTATGATAATCCCAATGCTCTTCGTGACTAC 850 || | || || ||||| ||| ||| || |||||||||||||||||| | |||||||| Sbjct 320 ACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACTAT 261 Query 851 TTCCGTGATATTGGTCGTATGGTGCTTACTGCCGAAGGTCGCTCGGTGCATGACTCATCT 910 || |||||||||||||||||||| ||| ||||||| |||||| || |||| ||| Sbjct 260 TTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACAC 201 Query 911 TCCGACTGCTATCAGTATTTTTGTGTGCCAGAGTATGGTACACAGCACGGTCGTCTACAT 970 |||||||||||||||||||||||||||| |||||||||||| | || ||||| ||| Sbjct 200 GCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTCAT 141 Query 971 TTCCACGCAGTGCATCTTATGCGCACACTTCCTCTGGGTTCTCTGCACCCTAACTTCGGT 1030 ||||| || ||||| ||||||| ||||||||| ||| | ||||||| || ||| Sbjct 140 TTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGT 81 Query 1031 AAGCTGGTACGCATCAATCGGCAAATAAATAGCTTGCAAAACACGTGGCCTTATGGTTAC 1090 | |||||||| || || |||||||||||||||| |||||||||||||||||| Sbjct 80 CGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTAC 21 Query 1091 TCTATGCCCATCGCAGT 1107 ||||||||||||||| Sbjct 20 AGTATGCCCATCGCAGT 4 >seq2 Length=506 Score = 93.3 bits (102), Expect = 1e-15 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 4870 AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACTATCTCGCCGCCGCATTCCCCGAG 4929 ||||||||| |||| || || ||||| || || ||||| || || ||||| || ||| Sbjct 340 AAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAG 281 Query 4930 CTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTAGTCCAGGCATGCAAGACGCTGGC 4989 || || | ||||| ||||||||||||| ||||| | | || ||| ||||| || Sbjct 280 CTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGA 221 Query 4990 TTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTGAC 5028 || | ||||| || ||||| || || ||||| || ||| Sbjct 220 TTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734161222930