Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_001422.1
Length=5386
Score E
Sequences producing significant alignments: (Bits) Value
seq4 904 0.0
seq2 574 2e-160
>seq4
Length=502
Score = 904 bits (1002), Expect = 0.0
Identities = 501/501 (100%), Gaps = 0/501 (0%)
Strand=Plus/Minus
Query 4408 GCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG 4467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG 443
Query 4468 AGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGC 4527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGC 383
Query 4528 GTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTC 4587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 382 GTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTC 323
Query 4588 TCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACT 4647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 322 TCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACT 263
Query 4648 ATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCAC 4707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 262 ATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCAC 203
Query 4708 ACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTC 4767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 ACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTC 143
Query 4768 ATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG 4827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 ATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG 83
Query 4828 GTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTT 4887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82 GTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTT 23
Query 4888 ACAGTATGCCCATCGCAGTTC 4908
|||||||||||||||||||||
Sbjct 22 ACAGTATGCCCATCGCAGTTC 2
>seq2
Length=506
Score = 574 bits (636), Expect = 2e-160
Identities = 320/321 (99%), Gaps = 0/321 (0%)
Strand=Plus/Minus
Query 3086 TAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCCCTAGTTTTGT 3145
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 506 TAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGT 447
Query 3146 TTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCAC 3205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 446 TTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCAC 387
Query 3206 TTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGA 3265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 TTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGA 327
Query 3266 TAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGA 3325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 326 TAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGA 267
Query 3326 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAA 3385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 266 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAA 207
Query 3386 AGAGCTTACTAAAATGCAACT 3406
|||||||||||||||||||||
Sbjct 206 AGAGCTTACTAAAATGCAACT 186
Score = 215 bits (238), Expect = 2e-52
Identities = 121/122 (99%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 3470 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 3529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 63
Query 3530 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTC 3589
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 62 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAAAACCAATCTTTC 3
Query 3590 CA 3591
||
Sbjct 2 CA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17122969452165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |