Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq4 904 0.0 seq2 574 2e-160 >seq4 Length=502 Score = 904 bits (1002), Expect = 0.0 Identities = 501/501 (100%), Gaps = 0/501 (0%) Strand=Plus/Minus Query 4408 GCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG 4467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502 GCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG 443 Query 4468 AGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGC 4527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 AGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAGC 383 Query 4528 GTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTC 4587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 GTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTC 323 Query 4588 TCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACT 4647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 TCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACT 263 Query 4648 ATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCAC 4707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 ATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCAC 203 Query 4708 ACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTC 4767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 ACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTC 143 Query 4768 ATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG 4827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 ATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTG 83 Query 4828 GTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTT 4887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 82 GTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTT 23 Query 4888 ACAGTATGCCCATCGCAGTTC 4908 ||||||||||||||||||||| Sbjct 22 ACAGTATGCCCATCGCAGTTC 2 >seq2 Length=506 Score = 574 bits (636), Expect = 2e-160 Identities = 320/321 (99%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 3086 TAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCCCTAGTTTTGT 3145 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 506 TAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGT 447 Query 3146 TTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCAC 3205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 TTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCAC 387 Query 3206 TTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGA 3265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 TTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGA 327 Query 3266 TAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGA 3325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 TAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGA 267 Query 3326 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAA 3385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 GCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAA 207 Query 3386 AGAGCTTACTAAAATGCAACT 3406 ||||||||||||||||||||| Sbjct 206 AGAGCTTACTAAAATGCAACT 186 Score = 215 bits (238), Expect = 2e-52 Identities = 121/122 (99%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 3470 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 3529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 63 Query 3530 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTC 3589 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 62 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAAAACCAATCTTTC 3 Query 3590 CA 3591 || Sbjct 2 CA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17122969452165