Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_001730.1
Length=6089
Score E
Sequences producing significant alignments: (Bits) Value
seq4 136 2e-28
seq2 78.8 4e-11
>seq4
Length=502
Score = 136 bits (150), Expect = 2e-28
Identities = 211/298 (71%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 1292 GGCTGGTTCTTTGTGTTTGACACGTTGACCCTTGCCGATGACCGTTTGCAGGCATTCAAT 1351
|| ||||| | || |||||||| | || | || || ||||| || |||| || ||
Sbjct 347 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 288
Query 1352 GAAAACCCCAATGCTCTTCGTGATTATTTTAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1411
|| || ||||||||| | ||||| |||||| | | ||||||| ||||| ||
Sbjct 287 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 228
Query 1412 GAAGGTCGTTCGGTTAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1471
|| ||||| || ||| ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 227 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 168
Query 1472 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1529
| || | |||| | || |||||||||| || | ||||| | ||||||| ||||
Sbjct 167 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 110
Query 1530 CTTTGGGAAGTCATGACCCTAACTTCGGTCGCCCGGTACGTAATTATCGCCAGATTAA 1587
|| || || ||||||||| || ||||| | |||||| ||| |||||| ||||
Sbjct 109 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAA 53
>seq2
Length=506
Score = 78.8 bits (86), Expect = 4e-11
Identities = 104/143 (73%), Gaps = 6/143 (4%)
Strand=Plus/Minus
Query 5465 AGGAAAGGCAACCCGTGATTACTTGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCG 5524
|||||||| || |||||||| | || || || || |||||||| || | ||||||||
Sbjct 323 AGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCG 264
Query 5525 TGCTGGAGCTGGTGCTTCCACTGCCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAA 5581
|||||| |||| ||||||| |||| || | | || | | ||||| |||||
Sbjct 263 TGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAA 207
Query 5582 AGAGATGCTTAAAATGCAACTGG 5604
|||| | ||||||||||||||
Sbjct 206 AGAGCTTACTAAAATGCAACTGG 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19369331755252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |