Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_007817.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq4 327 4e-86
seq2 123 9e-25
>seq4
Length=502
Score = 327 bits (362), Expect = 4e-86
Identities = 348/457 (76%), Gaps = 4/457 (1%)
Strand=Plus/Minus
Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712
|| |||||||||||||| || || | | | || |||| ||||| |||||||| ||||||
Sbjct 458 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 399
Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772
|||||| | | || | | |||||||| ||||| || || |||| || ||||
Sbjct 398 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 339
Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832
| || || || ||||| || | || || ||||| | ||| || ||||||||||||
Sbjct 338 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 279
Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892
|||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 278 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 219
Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952
| |||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 218 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC- 160
Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010
||| | |||||| | ||||| || || |||||| ||||||| ||||||||| |||
Sbjct 159 -AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 101
Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070
| |||||||| ||||| | ||| || | | || || |||||||||||||||
Sbjct 100 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 41
Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGT 1107
|||| ||||| ||||||||| |||||||||||| ||
Sbjct 40 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGT 4
>seq2
Length=506
Score = 123 bits (136), Expect = 9e-25
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 4789 CTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTGCATTCCCCGACCTCA 4848
|||| ||||||||||| ||||| || |||||||||||| ||||||| || || || |
Sbjct 336 CTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTA 277
Query 4849 ACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCC 4908
| | ||||| |||||||| |||| |||||| |||||||| ||||||||||| || ||
Sbjct 276 ATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTG 217
Query 4909 AAAACCAAAAAGA 4921
| || ||||||||
Sbjct 216 AGAATCAAAAAGA 204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17442965143665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |