Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq4 340 6e-90 seq2 116 1e-22 >seq4 Length=502 Score = 340 bits (376), Expect = 6e-90 Identities = 353/458 (77%), Gaps = 6/458 (1%) Strand=Plus/Minus Query 659 AAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCACCATGAAATCCCGCCGT 718 || |||| ||| |||||||| || | | | || |||| ||||| |||||||| || | Sbjct 458 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 399 Query 719 GGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCACACTGATGGCTGGTAT 778 |||||| | ||||| | ||||||||||| ||||| || || ||||||| |||| | Sbjct 398 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 339 Query 779 GTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGGACTTCTATGCTAACCC 837 | || || || |||||||| || ||||| || || |||| ||| || |||| ||| || Sbjct 338 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGGCGTTTTATGATAATCC 280 Query 838 CAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGTCG 897 ||||||| | ||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 279 CAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG 220 Query 898 TTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTGTGCCTGAGTATGGCAC 957 || |||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct 219 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC 160 Query 958 CCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCGCACACTTCCTTTGGGT 1015 ||| |||||||| | || || || || ||||| ||||||| ||||||||| ||| Sbjct 159 --AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGT 102 Query 1016 TCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAA 1075 | |||||||| |||||| | ||| || | | || || |||||||||||||| Sbjct 101 AGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAA 42 Query 1076 AACACATGGCCTTATGGTTACTCTATGCCCATCGCAGT 1113 || || ||||||||||||||| ||||||||||||||| Sbjct 41 AATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGT 4 >seq2 Length=506 Score = 116 bits (128), Expect = 1e-22 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 335 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 276 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 275 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 216 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGAC 4937 || ||||| || | ||| ||||| || ||| Sbjct 215 GAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17442965143665