Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_007856.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq4 340 6e-90
seq2 116 1e-22
>seq4
Length=502
Score = 340 bits (376), Expect = 6e-90
Identities = 353/458 (77%), Gaps = 6/458 (1%)
Strand=Plus/Minus
Query 659 AAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCACCATGAAATCCCGCCGT 718
|| |||| ||| |||||||| || | | | || |||| ||||| |||||||| || |
Sbjct 458 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 399
Query 719 GGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCACACTGATGGCTGGTAT 778
|||||| | ||||| | ||||||||||| ||||| || || ||||||| |||| |
Sbjct 398 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 339
Query 779 GTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGGACTTCTATGCTAACCC 837
| || || || |||||||| || ||||| || || |||| ||| || |||| ||| ||
Sbjct 338 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGGCGTTTTATGATAATCC 280
Query 838 CAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGTCG 897
||||||| | ||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct 279 CAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG 220
Query 898 TTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTGTGCCTGAGTATGGCAC 957
|| |||||||| | |||||||||||||| |||||||||||||||||||| ||
Sbjct 219 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTAC 160
Query 958 CCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCGCACACTTCCTTTGGGT 1015
||| |||||||| | || || || || ||||| ||||||| ||||||||| |||
Sbjct 159 --AGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGT 102
Query 1016 TCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAA 1075
| |||||||| |||||| | ||| || | | || || ||||||||||||||
Sbjct 101 AGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAA 42
Query 1076 AACACATGGCCTTATGGTTACTCTATGCCCATCGCAGT 1113
|| || ||||||||||||||| |||||||||||||||
Sbjct 41 AATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGT 4
>seq2
Length=506
Score = 116 bits (128), Expect = 1e-22
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843
||| |||| |||||| |||||||| |||||||||||| |||| || || || || ||
Sbjct 335 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 276
Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903
| ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| |
Sbjct 275 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 216
Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGAC 4937
|| ||||| || | ||| ||||| || |||
Sbjct 215 GAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17442965143665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |