Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_001330.1
Length=6087
Score E
Sequences producing significant alignments: (Bits) Value
seq114 437 3e-119
>seq114
Length=3343
Score = 437 bits (484), Expect = 3e-119
Identities = 765/1110 (69%), Gaps = 20/1110 (2%)
Strand=Plus/Plus
Query 3253 TCTAAGGTTGATTTTTTCACCTTCTACATTCCGCATCGTCATGTTTATGGCGACCAGTGG 3312
|||| || || |||| || || || | || |||||||| |||||||| || ||||||
Sbjct 2 TCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGG 61
Query 3313 ATTCAGTTTATGCGTGATGGTGTTAATGCTCAGCCTCTGCCTTCTGTTACTTGCAATCGC 3372
||| |||| ||| |||||||||||||| ||||| || |||||| | | |
Sbjct 62 ATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGT 121
Query 3373 TATCCGGACCATGCTGGTTATGTAGGTACTATTGTTCCTG---CAAATAACCGTATTCCT 3429
||| |||||||| | || | | || || ||| |||| | ||||| || |||
Sbjct 122 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAA---ATCCCT 178
Query 3430 AAGTTTTTGCATCAGAGCTATCTGAACATTTACAATAACTATTTCCGTGCCCCGTGGATG 3489
||| |||| |||| | ||| |||| || || || |||||||| || |||||||||
Sbjct 179 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATG 238
Query 3490 CCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATGAGGATGATGCTCGTTATCGCTTC 3549
||||| ||||||||||| ||||| | | |||||| | ||||||||||||||| | |||
Sbjct 239 CCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTC 298
Query 3550 CGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGCTGCCTCCGGAAACCAAATTGGCT 3609
||||||||||| || ||||| |||||| |||||||||| ||||| || || | | ||
Sbjct 299 CGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCT 358
Query 3610 GAAGAAATGGGTATTGAAAGCAATTCCATTGATATTATGGGTTTGCAAGCCGCTTATGCG 3669
||||| | | | || || ||||| ||||||||| ||||||| ||||||||
Sbjct 359 CGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCT 418
Query 3670 CAGCTTCACACTGAGCAGGAGCGTACTTACTTTATGCAGCGTTACCGTGATGTTATCTCC 3729
| | || ||||| || || ||| |||||| ||||||||||||| ||||||||| ||
Sbjct 419 AATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCT 478
Query 3730 AGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCACACC 3789
||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | |
Sbjct 479 TCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCT 538
Query 3790 GACTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAATTC 3849
| ||||||| || || || || ||||| || || |||||| | || | || || ||
Sbjct 539 AATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTT 598
Query 3850 TCTGGTCGAGTCCAGCAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCAT 3909
|||||||| || || ||||| | |||||| || |||||||| ||||| || |||||||||
Sbjct 599 TCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCAT 658
Query 3910 GGTGTCATGATGACTTTGGCTCTGATTCGCTTCCCGCCTATCAGTCCGTTGGAGCACCAT 3969
|| ||| | ||| | || || |||| || ||||||| | ||| ||
Sbjct 659 GGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAG 718
Query 3970 TATCTTGCTGGTAAGTCTCAGTTAACCTATACCGACCTTGCTGGCGACCCGGCTCTGATT 4029
|| ||| | ||| | || || |||||||| ||||||||||||| | | || |
Sbjct 719 TACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTAT 778
Query 4030 GGTAACTTGCCTCCTCGCGAGATTAGTTATCGA-GATCTGTTCCGTGATGGTCGTTCTGG 4088
|| |||||||| || || || ||| ||| | ||| | |||||| |||| |||
Sbjct 779 GGCAACTTGCCGCCGCGTGAAATT-TCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTC 837
Query 4089 TATTAAGATTAAAGTTGCCGAGTCTATTTGGTATCGTACTCATCCTGATTACGTTAACTT 4148
|| ||| |||| |||| ||| | ||||||||| | ||| || |||
Sbjct 838 TAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTCTCC 897
Query 4149 TAAGTATCATGATTTGCATGGATTCCCGTTCCTTGATGATGCGCCTGGTACATCTACTGG 4208
| ||||| | | | || ||||| ||| || | || ||| || ||||
Sbjct 898 TGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCTGG 948
Query 4209 TGATAATCTTCAGGAAGCTATCCTTGTTCGTCATCAGGACTATGATGCTTGCTTCCAGTC 4268
|| || | || ||| | ||| |||| || || || ||||| || ||||||||
Sbjct 949 TG---ATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTC 1005
Query 4269 TCAGCAGTTGCTACAGTGGAACAAACAGGCTCGCTATAACGTTAGTGTTTATCGCCATAT 4328
|||||| | |||||||| | |||| | | ||| || | ||||||||| || |
Sbjct 1006 CGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCT 1065
Query 4329 GCCTACTGTACGTGATTCCATTATGACCTC 4358
||| || || ||||| || ||||| ||
Sbjct 1066 GCCGACCACTCGCGATTCAATCATGACTTC 1095
Score = 82.4 bits (90), Expect = 3e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707
|||||||||| |||||||| || ||||| || || |||||||| || || ||||| |
Sbjct 2269 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 2328
Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762
| |||||||||||| ||| | || ||||| || ||||||||||||||
Sbjct 2329 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 2383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19363047079128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |