Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_001330.1 Length=6087 Score E Sequences producing significant alignments: (Bits) Value seq114 437 3e-119 >seq114 Length=3343 Score = 437 bits (484), Expect = 3e-119 Identities = 765/1110 (69%), Gaps = 20/1110 (2%) Strand=Plus/Plus Query 3253 TCTAAGGTTGATTTTTTCACCTTCTACATTCCGCATCGTCATGTTTATGGCGACCAGTGG 3312 |||| || || |||| || || || | || |||||||| |||||||| || |||||| Sbjct 2 TCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGG 61 Query 3313 ATTCAGTTTATGCGTGATGGTGTTAATGCTCAGCCTCTGCCTTCTGTTACTTGCAATCGC 3372 ||| |||| ||| |||||||||||||| ||||| || |||||| | | | Sbjct 62 ATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGT 121 Query 3373 TATCCGGACCATGCTGGTTATGTAGGTACTATTGTTCCTG---CAAATAACCGTATTCCT 3429 ||| |||||||| | || | | || || ||| |||| | ||||| || ||| Sbjct 122 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAA---ATCCCT 178 Query 3430 AAGTTTTTGCATCAGAGCTATCTGAACATTTACAATAACTATTTCCGTGCCCCGTGGATG 3489 ||| |||| |||| | ||| |||| || || || |||||||| || ||||||||| Sbjct 179 AAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATG 238 Query 3490 CCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATGAGGATGATGCTCGTTATCGCTTC 3549 ||||| ||||||||||| ||||| | | |||||| | ||||||||||||||| | ||| Sbjct 239 CCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTC 298 Query 3550 CGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGCTGCCTCCGGAAACCAAATTGGCT 3609 ||||||||||| || ||||| |||||| |||||||||| ||||| || || | | || Sbjct 299 CGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCT 358 Query 3610 GAAGAAATGGGTATTGAAAGCAATTCCATTGATATTATGGGTTTGCAAGCCGCTTATGCG 3669 ||||| | | | || || ||||| ||||||||| ||||||| |||||||| Sbjct 359 CGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCT 418 Query 3670 CAGCTTCACACTGAGCAGGAGCGTACTTACTTTATGCAGCGTTACCGTGATGTTATCTCC 3729 | | || ||||| || || ||| |||||| ||||||||||||| ||||||||| || Sbjct 419 AATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCT 478 Query 3730 AGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCACACC 3789 ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | | Sbjct 479 TCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCT 538 Query 3790 GACTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAATTC 3849 | ||||||| || || || || ||||| || || |||||| | || | || || || Sbjct 539 AATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTT 598 Query 3850 TCTGGTCGAGTCCAGCAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCAT 3909 |||||||| || || ||||| | |||||| || |||||||| ||||| || ||||||||| Sbjct 599 TCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCAT 658 Query 3910 GGTGTCATGATGACTTTGGCTCTGATTCGCTTCCCGCCTATCAGTCCGTTGGAGCACCAT 3969 || ||| | ||| | || || |||| || ||||||| | ||| || Sbjct 659 GGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAG 718 Query 3970 TATCTTGCTGGTAAGTCTCAGTTAACCTATACCGACCTTGCTGGCGACCCGGCTCTGATT 4029 || ||| | ||| | || || |||||||| ||||||||||||| | | || | Sbjct 719 TACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTAT 778 Query 4030 GGTAACTTGCCTCCTCGCGAGATTAGTTATCGA-GATCTGTTCCGTGATGGTCGTTCTGG 4088 || |||||||| || || || ||| ||| | ||| | |||||| |||| ||| Sbjct 779 GGCAACTTGCCGCCGCGTGAAATT-TCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTC 837 Query 4089 TATTAAGATTAAAGTTGCCGAGTCTATTTGGTATCGTACTCATCCTGATTACGTTAACTT 4148 || ||| |||| |||| ||| | ||||||||| | ||| || ||| Sbjct 838 TAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTCTCC 897 Query 4149 TAAGTATCATGATTTGCATGGATTCCCGTTCCTTGATGATGCGCCTGGTACATCTACTGG 4208 | ||||| | | | || ||||| ||| || | || ||| || |||| Sbjct 898 TGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCTGG 948 Query 4209 TGATAATCTTCAGGAAGCTATCCTTGTTCGTCATCAGGACTATGATGCTTGCTTCCAGTC 4268 || || | || ||| | ||| |||| || || || ||||| || |||||||| Sbjct 949 TG---ATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTC 1005 Query 4269 TCAGCAGTTGCTACAGTGGAACAAACAGGCTCGCTATAACGTTAGTGTTTATCGCCATAT 4328 |||||| | |||||||| | |||| | | ||| || | ||||||||| || | Sbjct 1006 CGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCT 1065 Query 4329 GCCTACTGTACGTGATTCCATTATGACCTC 4358 ||| || || ||||| || ||||| || Sbjct 1066 GCCGACCACTCGCGATTCAATCATGACTTC 1095 Score = 82.4 bits (90), Expect = 3e-12 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707 |||||||||| |||||||| || ||||| || || |||||||| || || ||||| | Sbjct 2269 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 2328 Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762 | |||||||||||| ||| | || ||||| || |||||||||||||| Sbjct 2329 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 2383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19363047079128