Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_001420.2
Length=5577
Score E
Sequences producing significant alignments: (Bits) Value
seq114 338 2e-89
>seq114
Length=3343
Score = 338 bits (374), Expect = 2e-89
Identities = 610/882 (69%), Gaps = 30/882 (3%)
Strand=Plus/Plus
Query 2792 GTTGATATCTTTCCTTTCTATATCCCACACCGTCATATCTACGGTCAGCAGTGGATTAAC 2851
|| || || ||| |||| ||| |||| || ||||| | || ||| | |||||||||||
Sbjct 8 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAG 67
Query 2852 TTTATGAAGGATGGCGTTAATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGTTGG 2911
|| ||||||||||| ||||||||| | ||||| || |||||| | | ||||||
Sbjct 68 TTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAA---CACTACTGGTTAT 124
Query 2912 ---GACTCTGCTGCTTATCTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAATTC 2968
||| ||| |||| ||| || || ||| || |||| |||| | |||||
Sbjct 125 ATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCAT 184
Query 2969 TTACATCAGGGCTATCTGAATATTTATAATAACTACTTCAAACCGCCTTGGTCTGATGAC 3028
|| |||||| ||| ||||||| ||||| ||||| || ||| |||| ||| ||| |
Sbjct 185 TTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGG----ATGCC 240
Query 3029 TTAACTTAC----GCTAACCCATCCAATATGCCTTCTGAGGATTATAAATGG---GGCGT 3081
| | | ||| |||||||| ||| || | | | ||| || | || |
Sbjct 241 TGACCGTACCGAGGCTAACCCT---AATGAGCTTAATCAAGATGATGCTCGTTATGGTTT 297
Query 3082 ACGTGTCGCTAACCTTAAATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTACATC 3141
||| | | || ||| || |||||||| || ||||| || || ||| ||
Sbjct 298 CCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTC 357
Query 3142 TGAAAACATGACTACTGGTACATCCACTATTGACATTATGGGCCTTCAAGCCGCATACGC 3201
| | ||||| ||| ||| | |||||||||||||||| || ||||| || || ||
Sbjct 358 TCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGC 417
Query 3202 TAAATTACATACGGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATTATGAA 3261
||| || ||||| || || |||||||||||||||||| ||||||| ||| ||||
Sbjct 418 TAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTC 477
Query 3262 AGAGTTCGGCGGTCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCGCTC 3321
|| || ||| | || || ||||| | |||||| |||||| | || ||||||||||
Sbjct 478 TTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTC 537
Query 3322 TGAATTTTGGGCATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCAATT 3381
| | | ||||||||||||||||| || || || ||||||||| | || | || || ||
Sbjct 538 TAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTT 597
Query 3382 CTCTGGTCGCGTTCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGAGCA 3441
|||||||| ||||| ||||||| || || || || || |||| ||||||||||||
Sbjct 598 TTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCA 657
Query 3442 TCGCGTAATTATGACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAAATG 3499
| || || | ||||| ||| || ||| |||||||||||| | ||| || ||
Sbjct 658 TGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATT 715
Query 3500 CACTATCTTGTAGGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCACTG 3559
|| || ||| | ||||| || |||||||||||||||||| | ||||||| ||
Sbjct 716 CAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG 775
Query 3560 -ATGGCTAACCTGCCACCTCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCTCACCC 3616
||||| ||| |||| || |||||| | || | || || | |||| || | | |
Sbjct 776 TATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTC 834
Query 3617 GATTCTGCTAAATTCAAAATCGCTGAGGGCCAATGGTATCGT 3658
| ||| || || || || |||||||| || |||||||||
Sbjct 835 G--TCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 874
Score = 163 bits (180), Expect = 1e-36
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154
|| |||||| | ||||| || || || ||||| |||||||| ||||| || ||| |
Sbjct 2292 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 2351
Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214
|| || ||||||| | ||||||| ||||| | |||||||| | || |||| ||
Sbjct 2352 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 2411
Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274
|| || ||| || |||||||| |||||||||||||| |||||||| || ||||| |||
Sbjct 2412 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 2471
Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327
||||| |||||||||||||| || | || | || ||| ||||||| ||||
Sbjct 2472 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 2524
Score = 154 bits (170), Expect = 5e-34
Identities = 325/482 (67%), Gaps = 17/482 (4%)
Strand=Plus/Plus
Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622
||||||||| |||| ||||||||||| || || || ||||| || ||| ||| |||
Sbjct 1745 TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 1804
Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682
||| ||||| |||||||| |||| ||| || || ||||| | || |||||| |
Sbjct 1805 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTAC 1864
Query 4683 CGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTAC 4742
||| |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1865 CGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAA 1924
Query 4743 TGTCCCTAACTCTCAGGAAGCTGCTCCCT-CTGCTATCTCTGGCATCCTTGCCGACTCTG 4801
||| |||||| || | || || | ||||| | | | ||||| | || | |||
Sbjct 1925 TGTTCCTAACCCTGATGAGGCCG-TCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTG 1983
Query 4802 G-CAAGCA-----------TGCGCTCTCGTCTCTTACCAATGCTGGTGCAAATAAACTCA 4849
| ||| | | || | | || || ||| | | | |||| |
Sbjct 1984 GTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGC 2043
Query 4850 TGGAGGCTGTCGGCCTTTCT---AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACT 4906
| || || || ||| | ||||||||| |||| || || ||||| || || |
Sbjct 2044 TTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATT 2103
Query 4907 ATCTCGCCGCCGCATTCCCCGAGCTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTA 4966
|||| || || ||||| || ||||| || | ||||| ||||||||||||| |||||
Sbjct 2104 ATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT 2163
Query 4967 GTCCAGGCATGCAAGACGCTGGCTTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTG 5026
| | || ||| ||||| || || | ||||| || ||||| || || ||||| || |
Sbjct 2164 CTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGG 2223
Query 5027 AC 5028
||
Sbjct 2224 AC 2225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17734263833060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |