Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_001730.1 Length=6089 Score E Sequences producing significant alignments: (Bits) Value seq114 508 2e-140 >seq114 Length=3343 Score = 508 bits (562), Expect = 2e-140 Identities = 781/1108 (70%), Gaps = 16/1108 (1%) Strand=Plus/Plus Query 3249 TCTAAGGTTGACTTTTTCACTTTCTATATTCCGCATCGTCATGTTTATGGTGATCAGTGG 3308 |||| || ||| |||| ||||| ||| | || |||||||| ||||||||||| |||||| Sbjct 2 TCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGG 61 Query 3309 ATTCAATTTATGCGTGATGGTGTTGATGCTTCGCCGCTTCCTTCCGTTACTACTACTAAG 3368 ||| | || ||| ||||||||| |||| | || || || | |||| |||||| Sbjct 62 ATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGT 121 Query 3369 TATCCGGATGATGCTGGTTATGTTGGTACTATTGTTCCTAAGAGCAACCGTATTCCTAAG 3428 ||| || |||| | || | |||| || ||| ||| | | ||| || |||||| Sbjct 122 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAG 181 Query 3429 TTTTTGCATCAGTCTTATCTGAATATTTATAATAACTATTTCCGTGCGCCGTGGATGCCT 3488 |||| |||| |||| ||||||| ||||| |||||||| ||||||||||||||| Sbjct 182 CATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCT 241 Query 3489 GAGCGTACTGAAGCTAATCCT-TCAAACTTAGATCGTGATGATTCTCGTTATGGATTCCG 3547 || ||||| || ||||| ||| | |||| ||| |||||| |||||||||| ||||| Sbjct 242 GACCGTACCGAGGCTAACCCTAATGAGCTTA-ATCAAGATGATGCTCGTTATGGTTTCCG 300 Query 3548 TTGTTGCCATCTTAAAACTATTTGGTCTGCTCCTCTTCCTCCGGAAACTAAGCTCGCTGA 3607 ||| |||||||| |||| |||||| ||||||| |||||||| || ||| |||| || Sbjct 301 TTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCG 360 Query 3608 GCAAATGGGCATTGAAAGCAATTCCATTGATATTATGGGTTTGCAGGCCGCTTATGCGCA 3667 |||||| | | | || || ||||| ||||||||| |||| || |||||||| | Sbjct 361 CCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAA 420 Query 3668 GCTTCACACTGAGCAGGAGCGTACTTATTTTATGCAGCGTTACCGTGATGTTATCTCCAG 3727 | || ||||| || || ||| ||| || ||||||||||||| ||||||||| || Sbjct 421 TTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTC 480 Query 3728 CTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCATACCGA 3787 ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | | Sbjct 481 ATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA 540 Query 3788 TTTTTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAGTTTTC 3847 | | ||||| || || || || ||||| || || |||||| | || | || |||||||| Sbjct 541 TCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTC 600 Query 3848 GGGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCATGG 3907 || || ||||||||||| | |||||| || |||||||| ||||| || ||||||||||| Sbjct 601 TGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGG 660 Query 3908 TGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGGAGCATCATTA 3967 ||| | ||| | ||| ||||| || ||||||| || ||| ||| || Sbjct 661 CACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTA 720 Query 3968 TCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCTGGTGACCCGGCTTTGATTGG 4027 ||| | | | ||||||||||||||| ||||||| ||||| | |||| ||| Sbjct 721 CCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGG 780 Query 4028 TAATTTGCCGCCGCGTGAGATTTCTTATCAGGACCTTTTCCGTGATGGTCGCCCGGGCAT 4087 || |||||||||||||| |||||| |||| |||||||| |||| || | Sbjct 781 CAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAA 840 Query 4088 TAAGATTAAGGTTGCCGAGTCTATCTGGTATCGTACTCATCCGGATTATGTTAACTAC-A 4146 ||| ||||| |||| ||| | ||||||||| | || |||||| || | Sbjct 841 GAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTT-TCTCCTG 899 Query 4147 AGTATCAGTTACTTGAGGGTTTCCCGTTCCTTGATGATGCGCCCGGTACGACTAGTGGTG 4206 ||||| | ||||| || ||||| ||| || | || ||| || ||||| Sbjct 900 CTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCTGGTG 950 Query 4207 ATGACCTTCAGAAGGCTATTCTCATTGACCATAATGACTATAATGCCTGTTTCCAGTCTC 4266 || | |||| || | || ||| ||| |||| ||| | ||||||||||| Sbjct 951 ATTTGC--AAGAACGC-GTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCG 1007 Query 4267 AGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTATAATGTTAATGTTTATCGCCATATTC 4326 |||||| | |||||||||| ||||| | | |||||| | ||||||||| || | | Sbjct 1008 TTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC 1067 Query 4327 CTACTGTTCGTGATTCTATTATGACCTC 4354 | || ||| ||||| || ||||| || Sbjct 1068 CGACCACTCGCGATTCAATCATGACTTC 1095 Score = 87.8 bits (96), Expect = 7e-14 Identities = 241/360 (67%), Gaps = 32/360 (9%) Strand=Plus/Plus Query 5252 TGATGCTGGTATTCAGTCTGCTATTCAGGGTTCTAATGTTCCTCCTGCTGGTCAATTGCC 5311 ||||||||||||| | ||||| ||||| || |||||||||||| ||| | | ||| Sbjct 1889 TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG--GCC 1946 Query 5312 --CGCTTCTAATACTTCTGGTGTTATGGCTGATGCTGGTAATATGATTCGTAATGCTGGT 5369 | || | | |||||||| ||||||| | |||||||| | || | | || ||| Sbjct 1947 GTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAA-AGGACTTCT--TGAAGGT 2003 Query 5370 AGAGCTTTGCTTGATGGTACGATTCAGGCTGGCTCTGATAAGGTTAAAGAGGCTCTTATT 5429 | | |||| | ||| || ||| | | | ||||||||| | ||| || Sbjct 2004 A---CGTTGCAGGCTGGCAC--TTCTGCC-GTTTCTGATAAGTT-------GCTTGATTT 2050 Query 5430 GATAAGTTGG--TTGGAGGTAATGATGCTAAAGACCGAGGAAAGGCAACCCGTGATTACT 5487 | ||||| |||| || || ||| || |||||||| || |||||||| Sbjct 2051 G----GTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATC 2106 Query 5488 TGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCGTGCTGGAGCTGGTGCTTCCACTG 5547 | || || || || |||||||| || | |||||||||||||| |||| ||||||| ||| Sbjct 2107 TTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTG 2166 Query 5548 CCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAAAGAGATGCTTAAAATGCAACTGG 5604 | || | | || | | ||||| ||||||||| | |||||||||||||| Sbjct 2167 CTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAAAGAGCTTACTAAAATGCAACTGG 2223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19369447028584