Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_001730.1
Length=6089
Score E
Sequences producing significant alignments: (Bits) Value
seq114 508 2e-140
>seq114
Length=3343
Score = 508 bits (562), Expect = 2e-140
Identities = 781/1108 (70%), Gaps = 16/1108 (1%)
Strand=Plus/Plus
Query 3249 TCTAAGGTTGACTTTTTCACTTTCTATATTCCGCATCGTCATGTTTATGGTGATCAGTGG 3308
|||| || ||| |||| ||||| ||| | || |||||||| ||||||||||| ||||||
Sbjct 2 TCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGG 61
Query 3309 ATTCAATTTATGCGTGATGGTGTTGATGCTTCGCCGCTTCCTTCCGTTACTACTACTAAG 3368
||| | || ||| ||||||||| |||| | || || || | |||| ||||||
Sbjct 62 ATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGT 121
Query 3369 TATCCGGATGATGCTGGTTATGTTGGTACTATTGTTCCTAAGAGCAACCGTATTCCTAAG 3428
||| || |||| | || | |||| || ||| ||| | | ||| || ||||||
Sbjct 122 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAG 181
Query 3429 TTTTTGCATCAGTCTTATCTGAATATTTATAATAACTATTTCCGTGCGCCGTGGATGCCT 3488
|||| |||| |||| ||||||| ||||| |||||||| |||||||||||||||
Sbjct 182 CATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCCT 241
Query 3489 GAGCGTACTGAAGCTAATCCT-TCAAACTTAGATCGTGATGATTCTCGTTATGGATTCCG 3547
|| ||||| || ||||| ||| | |||| ||| |||||| |||||||||| |||||
Sbjct 242 GACCGTACCGAGGCTAACCCTAATGAGCTTA-ATCAAGATGATGCTCGTTATGGTTTCCG 300
Query 3548 TTGTTGCCATCTTAAAACTATTTGGTCTGCTCCTCTTCCTCCGGAAACTAAGCTCGCTGA 3607
||| |||||||| |||| |||||| ||||||| |||||||| || ||| |||| ||
Sbjct 301 TTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCG 360
Query 3608 GCAAATGGGCATTGAAAGCAATTCCATTGATATTATGGGTTTGCAGGCCGCTTATGCGCA 3667
|||||| | | | || || ||||| ||||||||| |||| || |||||||| |
Sbjct 361 CCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAA 420
Query 3668 GCTTCACACTGAGCAGGAGCGTACTTATTTTATGCAGCGTTACCGTGATGTTATCTCCAG 3727
| || ||||| || || ||| ||| || ||||||||||||| ||||||||| ||
Sbjct 421 TTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTC 480
Query 3728 CTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCATACCGA 3787
||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | |
Sbjct 481 ATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAA 540
Query 3788 TTTTTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAGTTTTC 3847
| | ||||| || || || || ||||| || || |||||| | || | || ||||||||
Sbjct 541 TCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTC 600
Query 3848 GGGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCATGG 3907
|| || ||||||||||| | |||||| || |||||||| ||||| || |||||||||||
Sbjct 601 TGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGG 660
Query 3908 TGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGGAGCATCATTA 3967
||| | ||| | ||| ||||| || ||||||| || ||| ||| ||
Sbjct 661 CACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTA 720
Query 3968 TCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCTGGTGACCCGGCTTTGATTGG 4027
||| | | | ||||||||||||||| ||||||| ||||| | |||| |||
Sbjct 721 CCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGG 780
Query 4028 TAATTTGCCGCCGCGTGAGATTTCTTATCAGGACCTTTTCCGTGATGGTCGCCCGGGCAT 4087
|| |||||||||||||| |||||| |||| |||||||| |||| || |
Sbjct 781 CAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAA 840
Query 4088 TAAGATTAAGGTTGCCGAGTCTATCTGGTATCGTACTCATCCGGATTATGTTAACTAC-A 4146
||| ||||| |||| ||| | ||||||||| | || |||||| || |
Sbjct 841 GAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTT-TCTCCTG 899
Query 4147 AGTATCAGTTACTTGAGGGTTTCCCGTTCCTTGATGATGCGCCCGGTACGACTAGTGGTG 4206
||||| | ||||| || ||||| ||| || | || ||| || |||||
Sbjct 900 CTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCTGGTG 950
Query 4207 ATGACCTTCAGAAGGCTATTCTCATTGACCATAATGACTATAATGCCTGTTTCCAGTCTC 4266
|| | |||| || | || ||| ||| |||| ||| | |||||||||||
Sbjct 951 ATTTGC--AAGAACGC-GTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCG 1007
Query 4267 AGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTATAATGTTAATGTTTATCGCCATATTC 4326
|||||| | |||||||||| ||||| | | |||||| | ||||||||| || | |
Sbjct 1008 TTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGC 1067
Query 4327 CTACTGTTCGTGATTCTATTATGACCTC 4354
| || ||| ||||| || ||||| ||
Sbjct 1068 CGACCACTCGCGATTCAATCATGACTTC 1095
Score = 87.8 bits (96), Expect = 7e-14
Identities = 241/360 (67%), Gaps = 32/360 (9%)
Strand=Plus/Plus
Query 5252 TGATGCTGGTATTCAGTCTGCTATTCAGGGTTCTAATGTTCCTCCTGCTGGTCAATTGCC 5311
||||||||||||| | ||||| ||||| || |||||||||||| ||| | | |||
Sbjct 1889 TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG--GCC 1946
Query 5312 --CGCTTCTAATACTTCTGGTGTTATGGCTGATGCTGGTAATATGATTCGTAATGCTGGT 5369
| || | | |||||||| ||||||| | |||||||| | || | | || |||
Sbjct 1947 GTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAA-AGGACTTCT--TGAAGGT 2003
Query 5370 AGAGCTTTGCTTGATGGTACGATTCAGGCTGGCTCTGATAAGGTTAAAGAGGCTCTTATT 5429
| | |||| | ||| || ||| | | | ||||||||| | ||| ||
Sbjct 2004 A---CGTTGCAGGCTGGCAC--TTCTGCC-GTTTCTGATAAGTT-------GCTTGATTT 2050
Query 5430 GATAAGTTGG--TTGGAGGTAATGATGCTAAAGACCGAGGAAAGGCAACCCGTGATTACT 5487
| ||||| |||| || || ||| || |||||||| || ||||||||
Sbjct 2051 G----GTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATC 2106
Query 5488 TGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCGTGCTGGAGCTGGTGCTTCCACTG 5547
| || || || || |||||||| || | |||||||||||||| |||| ||||||| |||
Sbjct 2107 TTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTG 2166
Query 5548 CCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAAAGAGATGCTTAAAATGCAACTGG 5604
| || | | || | | ||||| ||||||||| | ||||||||||||||
Sbjct 2167 CTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAAAGAGCTTACTAAAATGCAACTGG 2223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19369447028584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |