Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq114 313 9e-82 >seq114 Length=3343 Score = 313 bits (346), Expect = 9e-82 Identities = 749/1107 (68%), Gaps = 38/1107 (3%) Strand=Plus/Plus Query 2738 GTGGATATCTTCTCTTTCTATATTCCGCATCGTCATATCTATGGTCAAGAATTCATTGAA 2797 || || || || |||| ||| | || |||||||| | |||||| || | | ||| | Sbjct 8 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAG 67 Query 2798 TTCATGAAAGCTGGCGTTAATGCCACTCCTCTCGCACCTGTTACTACTGCCTCTGGCTGG 2857 |||||||| | ||| |||||||||||||||||| | |||||| ||| | ||| | Sbjct 68 TTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTAC---TGGTTAT 124 Query 2858 GATGCTTCTGCC---TATCTTGGCACTATTCCATCCTCAAACCTC-AAGGTTCCTAAATT 2913 || |||| | ||||||||| ||| | ||| | ||| || | ||||| Sbjct 125 ATTGACCATGCCGCTTTTCTTGGCACGATTA-ACCCTGATACCAATAAAATCCCTAAGCA 183 Query 2914 CTTACATCAAGGATACCTTAATATTTACAACAACTACTTTAAGCCACCGTGGGATGC-TG 2972 || ||| || || | ||||| || |||||||| ||||| | |||||| |||| || Sbjct 184 TTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGG-ATGCCTG 242 Query 2973 ACCTTACATACGCTAACCCATCTAACATGCCTGAACAGGATTATAAATGG---GGCGTTC 3029 ||| ||| | |||||||| ||| || | | || ||| || | || | | Sbjct 243 ACCGTACCGAGGCTAACCC---TAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCC 299 Query 3030 GTGTC-GCTAACTTAAAATCTATCTGGACCGCCCCCTTACCTCCTAACTCTAAAACATCA 3088 || | || | || |||| | || ||||| || || | |||||| | || | || Sbjct 300 GTTGCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCT 358 Query 3089 GAGACTATGACCACTGGCGCTACGTCTATTGATATTATGGGCCTGCAAGCTGCTTATGCT 3148 ||||| ||| | || |||||||| |||||||| |||||||||||||||||| Sbjct 359 CGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCT 418 Query 3149 AAATTGCACACCCAACAAGAACGTGACTACTTCATGACTCGCTATCGCGATATTATGAAA 3208 || ||||| || | ||||||||||| ||||||||| || || | ||| |||| Sbjct 419 AATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCT 478 Query 3209 GACTTCGGAGGTCACACCTCCTATGACGGTGATAACCGTCCTCTGCTGCTTATGCGCTCT 3268 || |||||| | ||||| ||||||| ||| ||||||||| | || | ||||||||| Sbjct 479 TCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCT 538 Query 3269 GAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTC 3328 | | ||||| ||||||||||| || || || ||||||||| | || ||||| ||||| Sbjct 539 AATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTT 598 Query 3329 TCCGGTCGCGTCCAACAAACATTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACAC 3388 || ||||| || ||||| || | || || || || || |||| ||| ||||| || Sbjct 599 TCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCAT 658 Query 3389 GGCGTCATTATGACTCTCGCCGTTACTCGCTTCCCTCCTACT--CATGAAATGGAGATGC 3446 ||| || | ||||| || || ||| || || |||||| | ||| ||||| | Sbjct 659 GGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTC 716 Query 3447 ACTATCTTGTCGGTAAAGAATCTTTAACCTATACCGACCTCGCCTGCGACCCTGCTCT-T 3505 | || ||| || ||||| |||| || |||||||| | || ||||||||| | | | Sbjct 717 AGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGT 776 Query 3506 ATGGCTAACCTGCCTCCGCGCGAAGTATCCCTTAAGGAATTCTTCCACTCCTCGCCGGAC 3565 ||||| ||| |||| ||||| ||| | || | ||||| | |||| | || | || Sbjct 777 ATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCC-GTTCTGG--TGAT 832 Query 3566 TCCGCT---AAGTTCAAAATTGCCGAGGGCCAATGGTATCG-CACGCAGCCT--GACCGC 3619 || || ||||| || ||||| ||||| || |||||||| | || |||| | | Sbjct 833 TCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCTTCGTATGT 891 Query 3620 GTCGCATTCCCTTATAACGCACTTGACGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTAC 3678 || | | ||||| || ||||| ||||| || ||| | || | | ||| ||| Sbjct 892 TTCTCCT--GCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGG 948 Query 3679 TGACTTAAAACAACGTGTCCTAGTTAACACTGATAACTACGACGAAATCTTTCAGTCTAT 3738 ||| || || |||| || || || | || | || ||| | || ||||| | Sbjct 949 TGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGT 1008 Query 3739 GCAACTCGCACACTGGAATATGCAAACTAAATTTAATACTACCGTCTATAGACATATGCC 3798 || | || ||||||| || |||||||||| ||||| ||| | || |||| Sbjct 1009 TCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCC 1068 Query 3799 TACGACTCGTGATTCAATCATGACGTC 3825 || ||||| |||||||||||||| || Sbjct 1069 GACCACTCGCGATTCAATCATGACTTC 1095 Score = 203 bits (224), Expect = 1e-48 Identities = 538/808 (67%), Gaps = 44/808 (5%) Strand=Plus/Plus Query 4138 TAATCAGGTCTTCTCCGTCTGTGCTCACATCACATCTGACGTGGACCCTAAATATATTGC 4197 ||||||||| | || || ||||| | || | | ||| | |||||||||| | |||| Sbjct 1416 TAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC 1475 Query 4198 GTGCCTCGTTCGCTTTGAGGTCACTGCTGGTACCACTCCTACCGCTATGCCTCCTGTCTA 4257 || | |||||||||||| || | | | | ||| | || | || ||| ||| Sbjct 1476 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTAC--CCTC----CCGACTGCCTA 1529 Query 4258 TGATGCTTACCCTATCGCTGGTTACTATGACGCTGGCTCTTATACTGTTGAAGACTGCGC 4317 ||||| ||| ||| | | |||| | |||| | ||| | |||||| || | ||||| | Sbjct 1530 TGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGT 1589 Query 4318 TACTATT--CCTACTCACGCTGTCTCTTCTGGCAACGATGTATATGTCGGCCTTATGCTT 4375 |||||| | | || | | | | | ||||| |||| ||||| || | ||| || Sbjct 1590 GACTATTGACGTCCTTCCCCGTACGC--CGGGCAATAATGTTTATGTTGGTTTCATGGTT 1647 Query 4376 TTCTCTCGCATGTGGCCCGTTGCAAAACTATCCGGTATCGCTTCCCTTAATCAGGTAAAC 4435 | ||| | | ||| | | ||| ||| | | ||| || |||||||| | Sbjct 1648 TGGTCTAACTTTA---CCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATT 1704 Query 4436 AAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTCTCTATGTTTGGTGCAATCG 4494 || || | | |||||| || ||||| | |||| ||| |||||||||||| || | Sbjct 1705 AAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT---TATGTTTGGTGCTATTG 1761 Query 4495 CTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAACAAAGCCTTTGGGGGCGGTC 4554 |||||||||| || || |||||||||| || ||| ||| ||||| ||||||| Sbjct 1762 CTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTC 1821 Query 4555 AATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCTTC---TGACAATAACGTA- 4610 || ||| |||| |||| ||||||||||||| || ||| | | |||||| ||| Sbjct 1822 AAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAG 1881 Query 4611 --ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAAGGCTCTAATCCACCCAATG 4668 || || |||||||||||| ||||| || ||||||||||||||| || || Sbjct 1882 GCATGGG------TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACC 1935 Query 4669 GCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCTGACACTGGCAAA-GACGCC 4727 | | || | || | | | |||| || | | | ||| | |||| ||| ||| | Sbjct 1936 CTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTC 1995 Query 4728 CT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAATAAACTTATGGAAAAAATCG 4776 | | | | | || ||||| ||| ||| | |||| | | || | | Sbjct 1996 TTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTG 2055 Query 4777 GACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTG 4833 |||| | || |||| ||||||||||| ||||| || |||||||||||| ||| Sbjct 2056 GACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTG 2115 Query 4834 CATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGG 4893 |||| || || || || | ||||| |||||||| |||| |||||| |||||||| |||| Sbjct 2116 CATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG 2175 Query 4894 TTGACGCTGGCTTCCAAAACCAAAAAGA 4921 ||||||| || || | || |||||||| Sbjct 2176 TTGACGCCGGATTTGAGAATCAAAAAGA 2203 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 2295 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 2354 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 2355 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 2414 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 2415 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 2474 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 2475 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 2524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443066068930