Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq114 475 1e-130 >seq114 Length=3343 Score = 475 bits (526), Expect = 1e-130 Identities = 781/1114 (70%), Gaps = 28/1114 (3%) Strand=Plus/Plus Query 3274 CTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCATGTATATGGTGAGCAGTG 3333 |||| ||| ||| | || || |||||||||||||||||||| || |||||||| ||||| Sbjct 1 CTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTG 60 Query 3334 GATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCCCCTGTTCAGTGCTCTCG 3393 |||| | || |||||| | |||||| |||| ||||| | | ||||| | | || Sbjct 61 GATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAA---CACTAC 117 Query 3394 CGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTCCGTCTAGTAACTTAAAGGT 3447 |||| ||| || || | ||||| || ||| || || | || | Sbjct 118 TGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAAT 174 Query 3448 TCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATAATTACTTTAAAGCTCCG 3505 |||||| ||| || ||| ||||| |||| || || || || || |||||||| ||| Sbjct 175 CCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCG 232 Query 3506 TGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGGGTGAAGATGTTCGTTTT 3565 |||||| ||||| || | || ||||| | | | | || |||| ||||| | Sbjct 233 TGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTAT 292 Query 3566 GGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGCTTCCTCCGGATACTGAA 3625 ||| | ||| || | | |||| ||||||||||||||||||||||| || ||||| Sbjct 293 GGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAG 352 Query 3626 ACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTATGGGTTTGCAGGCCGCT 3685 |||| ||| |||| |||| || ||||||||||||||| |||| || ||| Sbjct 353 CTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCT 412 Query 3686 TATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGACTCGTTATCGTGATATT 3745 |||||| | || |||||||| || || ||||||||||||||| ||||| | |||| || Sbjct 413 TATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTT 472 Query 3746 GTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATCGTCCTTTGCTTGTTATG 3805 || ||||||||||| || |||||||| || || || |||||||| ||||| ||| Sbjct 473 ATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATG 532 Query 3806 CATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCGACCAAAGCTCTCTCGGT 3865 | ||| | ||||||| || |||||||||||||| || || ||||||| || | || Sbjct 533 CGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGC 592 Query 3866 CAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTACCGCGATTCTTCTGCCCT 3925 ||||| || |||||||| || ||||| | ||| ||||| || ||||| ||||| ||| Sbjct 593 CAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCT 652 Query 3926 GAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGCCGACT--CATGAAATGG 3983 ||||||||||||||||| || || || | || || || ||||| ||| | ||| | Sbjct 653 GAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--G 710 Query 3984 AGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGATTTGGCTTGTGACCCTG 4043 |||| || ||| | | ||||| | |||||||||||| ||| | ||| | ||||||| Sbjct 711 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 770 Query 4044 CTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTCAGTTCTTCCATTCTGGA 4102 |||| ||||| |||||||| || ||||| || |||| | | |||| |||||| Sbjct 771 TTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 829 Query 4103 AGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATCG-CATGCAGCCTGATCG 4161 | | | ||||||||||| ||||| |||||||||||||| |||| |||| ||| Sbjct 830 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCT--TCG 886 Query 4162 --CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCTATAGCGCGATTCCGTCT 4219 ||| | | ||| || |||||| || || || ||| | | || ||| Sbjct 887 TATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGCCTTCT 946 Query 4220 GATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACGATGAGGTTTTCCAGTCT 4279 | |||| | | | ||||| || || || | || || || ||||||||| Sbjct 947 GGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCC 1006 Query 4280 ATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCACCATTTATCGTAATATG 4339 | ||| | ||| ||||||| ||| ||| |||||| ||| ||||||| ||| || Sbjct 1007 GTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTG 1066 Query 4340 CCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373 |||||||||||||| || || ||||| || |||| Sbjct 1067 CCGACCACTCGCGATTCAATCATGACTTCGTGAT 1100 Score = 156 bits (172), Expect = 2e-34 Identities = 282/407 (69%), Gaps = 18/407 (4%) Strand=Plus/Plus Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502 ||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| | Sbjct 2083 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 2142 Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559 ||||||| |||| ||||||| ||| || ||| |||| ||||||| || Sbjct 2143 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 2199 Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619 | ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | | Sbjct 2200 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 2259 Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679 | | |||||||||| |||||||| || ||||| ||| |||||||||| || | Sbjct 2260 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 2319 Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739 | ||||| || |||||||||||| | | | || ||||||| || ||||||| || Sbjct 2320 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 2379 Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794 |||| | | ||||| | ||| | || | | |||| | || || |||||| | Sbjct 2380 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 2436 Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840 |||| ||||||| ||||| | |||||||| |||| || ||| Sbjct 2437 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 2480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19302247559296