Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_007821.1
Length=6068
Score E
Sequences producing significant alignments: (Bits) Value
seq114 475 1e-130
>seq114
Length=3343
Score = 475 bits (526), Expect = 1e-130
Identities = 781/1114 (70%), Gaps = 28/1114 (3%)
Strand=Plus/Plus
Query 3274 CTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCATGTATATGGTGAGCAGTG 3333
|||| ||| ||| | || || |||||||||||||||||||| || |||||||| |||||
Sbjct 1 CTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTG 60
Query 3334 GATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCCCCTGTTCAGTGCTCTCG 3393
|||| | || |||||| | |||||| |||| ||||| | | ||||| | | ||
Sbjct 61 GATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAA---CACTAC 117
Query 3394 CGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTCCGTCTAGTAACTTAAAGGT 3447
|||| ||| || || | ||||| || ||| || || | || |
Sbjct 118 TGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAAT 174
Query 3448 TCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATAATTACTTTAAAGCTCCG 3505
|||||| ||| || ||| ||||| |||| || || || || || |||||||| |||
Sbjct 175 CCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCG 232
Query 3506 TGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGGGTGAAGATGTTCGTTTT 3565
|||||| ||||| || | || ||||| | | | | || |||| ||||| |
Sbjct 233 TGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTAT 292
Query 3566 GGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGCTTCCTCCGGATACTGAA 3625
||| | ||| || | | |||| ||||||||||||||||||||||| || |||||
Sbjct 293 GGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAG 352
Query 3626 ACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTATGGGTTTGCAGGCCGCT 3685
|||| ||| |||| |||| || ||||||||||||||| |||| || |||
Sbjct 353 CTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCT 412
Query 3686 TATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGACTCGTTATCGTGATATT 3745
|||||| | || |||||||| || || ||||||||||||||| ||||| | |||| ||
Sbjct 413 TATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTT 472
Query 3746 GTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATCGTCCTTTGCTTGTTATG 3805
|| ||||||||||| || |||||||| || || || |||||||| ||||| |||
Sbjct 473 ATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATG 532
Query 3806 CATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCGACCAAAGCTCTCTCGGT 3865
| ||| | ||||||| || |||||||||||||| || || ||||||| || | ||
Sbjct 533 CGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGC 592
Query 3866 CAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTACCGCGATTCTTCTGCCCT 3925
||||| || |||||||| || ||||| | ||| ||||| || ||||| ||||| |||
Sbjct 593 CAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCT 652
Query 3926 GAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGCCGACT--CATGAAATGG 3983
||||||||||||||||| || || || | || || || ||||| ||| | ||| |
Sbjct 653 GAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--G 710
Query 3984 AGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGATTTGGCTTGTGACCCTG 4043
|||| || ||| | | ||||| | |||||||||||| ||| | ||| | |||||||
Sbjct 711 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 770
Query 4044 CTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTCAGTTCTTCCATTCTGGA 4102
|||| ||||| |||||||| || ||||| || |||| | | |||| ||||||
Sbjct 771 TTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 829
Query 4103 AGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATCG-CATGCAGCCTGATCG 4161
| | | ||||||||||| ||||| |||||||||||||| |||| |||| |||
Sbjct 830 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCT--TCG 886
Query 4162 --CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCTATAGCGCGATTCCGTCT 4219
||| | | ||| || |||||| || || || ||| | | || |||
Sbjct 887 TATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGCCTTCT 946
Query 4220 GATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACGATGAGGTTTTCCAGTCT 4279
| |||| | | | ||||| || || || | || || || |||||||||
Sbjct 947 GGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCC 1006
Query 4280 ATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCACCATTTATCGTAATATG 4339
| ||| | ||| ||||||| ||| ||| |||||| ||| ||||||| ||| ||
Sbjct 1007 GTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTG 1066
Query 4340 CCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373
|||||||||||||| || || ||||| || ||||
Sbjct 1067 CCGACCACTCGCGATTCAATCATGACTTCGTGAT 1100
Score = 156 bits (172), Expect = 2e-34
Identities = 282/407 (69%), Gaps = 18/407 (4%)
Strand=Plus/Plus
Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502
||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| |
Sbjct 2083 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 2142
Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559
||||||| |||| ||||||| ||| || ||| |||| ||||||| ||
Sbjct 2143 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 2199
Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619
| ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | |
Sbjct 2200 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 2259
Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679
| | |||||||||| |||||||| || ||||| ||| |||||||||| || |
Sbjct 2260 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 2319
Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739
| ||||| || |||||||||||| | | | || ||||||| || ||||||| ||
Sbjct 2320 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 2379
Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794
|||| | | ||||| | ||| | || | | |||| | || || |||||| |
Sbjct 2380 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 2436
Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840
|||| ||||||| ||||| | |||||||| |||| || |||
Sbjct 2437 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 2480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19302247559296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |