Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_007856.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq114 379 7e-102
>seq114
Length=3343
Score = 379 bits (420), Expect = 7e-102
Identities = 854/1258 (68%), Gaps = 69/1258 (5%)
Strand=Plus/Plus
Query 2748 GTCGACGTCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGATTGAC 2807
|| ||| | |||||||| ||| ||||||||||||| || |||||| |||| |||||| |
Sbjct 8 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAG 67
Query 2808 TTTATGAAGACTGGCGTTAACGCTACTCCTCTGGCTCCGGT-AACTTGTTCCTCTGGCTG 2866
|| |||||| ||| ||||| || |||||||| | | || ||| | |||| |
Sbjct 68 TTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACA----CTACTGGTTA 123
Query 2867 G---GATTCTGCTGCCTATCTTGGCACTATC--CCGTCA-ACTAATTTGAAGGTTCCTAA 2920
|| ||| || | ||||||||| || || | | || ||| || | |||||
Sbjct 124 TATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT---AAAATCCCTAA 180
Query 2921 --ATTCCTTCATCAATCTTATCTCAATATTTACAACAACTACTTTAAGCCGCCGTGGTCT 2978
||| || ||| |||| | ||||| || |||||||| ||||| ||||||||
Sbjct 181 GCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATG 238
Query 2979 AATGACCTCACCTATGCTAACCCATCTAATATGCCCGCTGAGGATTACAAATGG---GGC 3035
||||| ||| | |||||||| |||| || | | ||| | | ||
Sbjct 239 CCTGACCGTACCGAGGCTAACCC---TAATGAGCTTAATCAAGATGATGCTCGTTATGGT 295
Query 3036 GTTCGTGTC-GCTAACTTAAAATCTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC 3094
| ||| | || | || |||| | || ||||| || || ||||||||||| | | | |
Sbjct 296 TTCCGTTGCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGC 353
Query 3095 TAAGCAGG-ATATGACTACTGGCGCTACCAC---TATCGATATTATGGGCCTACAAGCTG 3150
| | | ||||| ||| ||||||| ||| || |||||||| || |||||||
Sbjct 354 TTTCTCGCCAAATGACGACTT---CTACCACATCTATTGACATTATGGGTCTGCAAGCTG 410
Query 3151 CCTATGCTAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGCGATA 3210
| |||||||| | || ||||| || |||||||| || |||||| || |||| |||
Sbjct 411 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 470
Query 3211 TTATGAAAGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGA 3270
|||| ||||| ||| | ||||| || |||| ||| ||||||||| | || | |
Sbjct 471 TTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 530
Query 3271 TGCGCTCTGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCATTGG 3330
|||||||| | | ||||| ||||||||||| || || || ||||||||||| || || |
Sbjct 531 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 590
Query 3331 GTCAGTTCTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTC 3390
| ||||| |||||||| || ||||| |||| ||| ||| ||||| || |||| |||||
Sbjct 591 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 650
Query 3391 CTGAGCATGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAAT 3448
||||||||||| || | ||| | | || ||| || || |||||| || |||
Sbjct 651 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA- 709
Query 3449 GGAAATGCACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTGACCC 3508
|| || || || || || ||| | || |||||||||| || ||||| | |||||
Sbjct 710 -GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCC 768
Query 3509 TGCTCT-TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTG 3567
|| | | |||||| ||| |||| |||||||||||| | || || | || | ||||
Sbjct 769 TGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTG 827
Query 3568 CTGGT---ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACC 3624
|| | || || || || ||||| || ||||| ||||||||| | ||||
Sbjct 828 GTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGT 887
Query 3625 GCGTTGCCTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGT 3681
||| | ||| ||||| || |||||| |||||||| ||| |||| |||| ||| |
Sbjct 888 ATGTTTC--TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTT 944
Query 3682 CTAATGATATTCTCGAACGTGTACTTGTTCGAACTGATAACTATGATGAAATCTTCCAGT 3741
|| |||| | | ||||| |||||| |||| || | ||||| | |||||||
Sbjct 945 CTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGT 1004
Query 3742 CTATGCAACTTGCACACTGGAACATGCAAACTAAATTTAACACTACTGTATATCGTCATA 3801
| | || | || ||||| | || ||||||||| || || ||||| ||
Sbjct 1005 CCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATC 1064
Query 3802 TGCCTACCACTCGTGATGGCATCATGA---CGTCATAAAA---------------CAAAA 3843
|||| |||||||| ||| ||||||| ||| |||||| | ||
Sbjct 1065 TGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAA 1124
Query 3844 CGTTGAACGGGTACAAATTTTAATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTT 3903
|| ||| |||| |||||||||||| |||| | |||||| ||||||||||||| |
Sbjct 1125 CGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGT 1184
Query 3904 AGCTAACTTACTTAAGGAAATT-CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960
|| | | ||| |||| || |||||||||| |||| | | ||| ||||||||
Sbjct 1185 AGGTTTTCTGCTT-AGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 1241
Score = 179 bits (198), Expect = 1e-41
Identities = 658/1047 (63%), Gaps = 71/1047 (7%)
Strand=Plus/Plus
Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504
||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || ||
Sbjct 1720 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1777
Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564
|||| |||||||| | || ||| || || |||||| || ||
Sbjct 1778 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 1837
Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618
|||| |||||||| |||| || ||||| || ||||| |||| || |||| |
Sbjct 1838 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 1891
Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678
||||||||| ||||| || ||||| || |||||| ||| || | | | || | ||
Sbjct 1892 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 1951
Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734
| | | | || || | | | || | |||| |||| || | | | | | | ||
Sbjct 1952 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 2011
Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783
||||| || | |||| |||| | | || | ||||| | |||
Sbjct 2012 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 2071
Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843
||| |||| |||||| |||||||| |||||||||||| |||| || || || || ||
Sbjct 2072 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 2131
Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903
| ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| |
Sbjct 2132 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 2191
Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963
|| ||||| || | ||| ||||| || |||
Sbjct 2192 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 2251
Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023
|| ||||| | ||||| || || ||||| ||
Sbjct 2252 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 2311
Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083
||| || ||||| ||||| || ||||| || | || || || |||| | ||
Sbjct 2312 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 2371
Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143
||||| ||||| | |||||||| | || |||| ||||| || ||| || |||||
Sbjct 2372 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 2431
Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203
||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| |
Sbjct 2432 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 2491
Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263
|||| | ||||| ||||| | ||||| |||| |||| | || |
Sbjct 2492 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 2538
Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323
| | | |||| | | || || | || || ||
Sbjct 2539 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 2569
Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383
| || || || |||||| | || |||||| | | ||| || |||||||| | ||
Sbjct 2570 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 2629
Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443
|||| ||||| ||| ||||||||||||| || |||||||||||||||| | |||||
Sbjct 2630 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 2689
Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470
|| ||| | ||||| || |||| ||
Sbjct 2690 CGGTAAAGCTGATGGTATTGGCTCTAA 2716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17443066068930
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