Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq114 379 7e-102 >seq114 Length=3343 Score = 379 bits (420), Expect = 7e-102 Identities = 854/1258 (68%), Gaps = 69/1258 (5%) Strand=Plus/Plus Query 2748 GTCGACGTCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGATTGAC 2807 || ||| | |||||||| ||| ||||||||||||| || |||||| |||| |||||| | Sbjct 8 GTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAG 67 Query 2808 TTTATGAAGACTGGCGTTAACGCTACTCCTCTGGCTCCGGT-AACTTGTTCCTCTGGCTG 2866 || |||||| ||| ||||| || |||||||| | | || ||| | |||| | Sbjct 68 TTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACA----CTACTGGTTA 123 Query 2867 G---GATTCTGCTGCCTATCTTGGCACTATC--CCGTCA-ACTAATTTGAAGGTTCCTAA 2920 || ||| || | ||||||||| || || | | || ||| || | ||||| Sbjct 124 TATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT---AAAATCCCTAA 180 Query 2921 --ATTCCTTCATCAATCTTATCTCAATATTTACAACAACTACTTTAAGCCGCCGTGGTCT 2978 ||| || ||| |||| | ||||| || |||||||| ||||| |||||||| Sbjct 181 GCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATG 238 Query 2979 AATGACCTCACCTATGCTAACCCATCTAATATGCCCGCTGAGGATTACAAATGG---GGC 3035 ||||| ||| | |||||||| |||| || | | ||| | | || Sbjct 239 CCTGACCGTACCGAGGCTAACCC---TAATGAGCTTAATCAAGATGATGCTCGTTATGGT 295 Query 3036 GTTCGTGTC-GCTAACTTAAAATCTATCTGGACCGCGCCCCTTCCTCCTGATTCATTAAC 3094 | ||| | || | || |||| | || ||||| || || ||||||||||| | | | | Sbjct 296 TTCCGTTGCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-TGAGC 353 Query 3095 TAAGCAGG-ATATGACTACTGGCGCTACCAC---TATCGATATTATGGGCCTACAAGCTG 3150 | | | ||||| ||| ||||||| ||| || |||||||| || ||||||| Sbjct 354 TTTCTCGCCAAATGACGACTT---CTACCACATCTATTGACATTATGGGTCTGCAAGCTG 410 Query 3151 CCTATGCTAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGCGATA 3210 | |||||||| | || ||||| || |||||||| || |||||| || |||| ||| Sbjct 411 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 470 Query 3211 TTATGAAAGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGA 3270 |||| ||||| ||| | ||||| || |||| ||| ||||||||| | || | | Sbjct 471 TTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 530 Query 3271 TGCGCTCTGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCATTGG 3330 |||||||| | | ||||| ||||||||||| || || || ||||||||||| || || | Sbjct 531 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 590 Query 3331 GTCAGTTCTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTC 3390 | ||||| |||||||| || ||||| |||| ||| ||| ||||| || |||| ||||| Sbjct 591 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 650 Query 3391 CTGAGCATGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAAT 3448 ||||||||||| || | ||| | | || ||| || || |||||| || ||| Sbjct 651 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA- 709 Query 3449 GGAAATGCACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTGACCC 3508 || || || || || || ||| | || |||||||||| || ||||| | ||||| Sbjct 710 -GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCC 768 Query 3509 TGCTCT-TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTG 3567 || | | |||||| ||| |||| |||||||||||| | || || | || | |||| Sbjct 769 TGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTG 827 Query 3568 CTGGT---ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACC 3624 || | || || || || ||||| || ||||| ||||||||| | |||| Sbjct 828 GTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGT 887 Query 3625 GCGTTGCCTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTCTATTC-TGAACTGCCGT 3681 ||| | ||| ||||| || |||||| |||||||| ||| |||| |||| ||| | Sbjct 888 ATGTTTC--TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTT 944 Query 3682 CTAATGATATTCTCGAACGTGTACTTGTTCGAACTGATAACTATGATGAAATCTTCCAGT 3741 || |||| | | ||||| |||||| |||| || | ||||| | ||||||| Sbjct 945 CTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGT 1004 Query 3742 CTATGCAACTTGCACACTGGAACATGCAAACTAAATTTAACACTACTGTATATCGTCATA 3801 | | || | || ||||| | || ||||||||| || || ||||| || Sbjct 1005 CCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATC 1064 Query 3802 TGCCTACCACTCGTGATGGCATCATGA---CGTCATAAAA---------------CAAAA 3843 |||| |||||||| ||| ||||||| ||| |||||| | || Sbjct 1065 TGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAA 1124 Query 3844 CGTTGAACGGGTACAAATTTTAATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCGCGTT 3903 || ||| |||| |||||||||||| |||| | |||||| ||||||||||||| | Sbjct 1125 CGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGT 1184 Query 3904 AGCTAACTTACTTAAGGAAATT-CTCATGTTTCAAACTTATCTCTCTAAACATAATTC 3960 || | | ||| |||| || |||||||||| |||| | | ||| |||||||| Sbjct 1185 AGGTTTTCTGCTT-AGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTC 1241 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Plus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 1720 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1777 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 1778 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 1837 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 1838 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 1891 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 1892 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 1951 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 1952 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 2011 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 2012 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 2071 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 2072 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 2131 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 2132 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 2191 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 2192 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 2251 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 2252 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 2311 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 2312 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 2371 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 2372 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 2431 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 2432 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 2491 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 2492 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 2538 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 2539 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 2569 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 2570 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 2629 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 2630 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 2689 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 2690 CGGTAAAGCTGATGGTATTGGCTCTAA 2716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443066068930