Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_012868.1 Length=6094 Score E Sequences producing significant alignments: (Bits) Value seq114 502 1e-138 >seq114 Length=3343 Score = 502 bits (556), Expect = 1e-138 Identities = 785/1117 (70%), Gaps = 22/1117 (2%) Strand=Plus/Plus Query 3251 CTCTAAGGTTGATTTTTTCACTTTCTATATTCCGCATCGCCATGTTTATGGTGACCAGTG 3310 ||||| || || |||| ||||| ||| | || ||||| || ||||||||||| ||||| Sbjct 1 CTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTG 60 Query 3311 GATTCAATTTATGCGTGATGGTGTTGATGCCGCACCACTCCCTTCCGTTACTACTACTCA 3370 |||| | || ||| ||||||||| ||||| | || ||||| | |||| |||||| Sbjct 61 GATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGG 120 Query 3371 GTATCCGGATGACGCTGGTTATGTTGGTACTATTGTTCCTAAGAGCAACCGTATTCCTAA 3430 ||| || | || | || | |||| || ||| ||| | | ||| || ||||| Sbjct 121 TTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAA 180 Query 3431 GTTTTTGCATCAGTCTTATCTGAATATTTATAATAACTATTTCCGTGCGCCGTGGATGCC 3490 | |||| |||| |||| ||||||| ||||| |||||||| |||||||||||||| Sbjct 181 GCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCC 240 Query 3491 TGAGCGTACTGAAGCTAATCCTTCAAAT----TTAGACCGTGATGATTCTCGCTATGGAT 3546 ||| ||||| || ||||| ||| ||| ||| | | |||||| |||| ||||| | Sbjct 241 TGACCGTACCGAGGCTAACCCT---AATGAGCTTA-ATCAAGATGATGCTCGTTATGGTT 296 Query 3547 TCCGTTGCTGCCATCTTAAAACTATTTGGTCTGCTCCTCTTCCTCCGGAAACTAAGCTCG 3606 |||||||||||||||| |||| |||||| ||||||| |||||||| || ||| |||| Sbjct 297 TCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTT 356 Query 3607 CTGAGCAAATGGGCATTGAAAGCAATTCCATTGATATTATGGGTTTGCAGGCCGCTTATG 3666 || |||||| | | | || || ||||| ||||||||| |||| || ||||||| Sbjct 357 CTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATG 416 Query 3667 CGCAGCTTCATACTGAGCAGGAGCGTACTTATTTCATGCAGCGTTATCGTGATGTTATCT 3726 | | | |||||||| || || ||| ||| |||||||||||||| | ||||||||| | Sbjct 417 CTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTT 476 Query 3727 CCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCACA 3786 | ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | Sbjct 477 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCT 536 Query 3787 CCGATTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTCGGACAGT 3846 | || ||||||| || || || || ||||| || || |||||| | || | || |||| Sbjct 537 CTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGT 596 Query 3847 TTTCGGGTCGAGTCCAACAGACGTTTAAACACTCAGTGCCTCGATTCTTCGTGCCGGAGC 3906 |||| ||||| || |||||||| | |||||| || ||||| || ||||| || || |||| Sbjct 597 TTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGC 656 Query 3907 ATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGGAGCATC 3966 |||| ||| | ||| | ||| ||||| || ||||||| || ||| || Sbjct 657 ATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTC 716 Query 3967 ATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCGGGTGACCCGGCTTTGA 4026 | || ||| | | | ||||||||||||||| |||| || ||||| | |||| Sbjct 717 AGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGT 776 Query 4027 TTGGTAATTTGCCGCCACGTGAGATTTCTTATCAGGATCTTTTCCGTGATGGTCGTCCGG 4086 ||| || |||||||| ||||| |||||| ||||| |||||||| |||| | || Sbjct 777 ATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGT 836 Query 4087 GCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGTACTCATCCGGATTATGTTAACT 4146 | ||| ||||| |||| ||| | ||||||||| | || |||||| || Sbjct 837 CTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTT-TCT 895 Query 4147 AC-AAGTATCAGTTACTTGAAGGTTTTCCGTTCCTTGATGATGCGCCCGGTACGACTAGT 4205 | ||||| | |||||||| || || ||| || | || ||| || | Sbjct 896 CCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCT 946 Query 4206 GGTGATGACCTTCAGAAGGCTATTCTCATTGACCATAATGACTATAATGCCTGTTTCCAG 4265 |||||| | |||| || | || ||| ||| |||| ||| | ||||||||| Sbjct 947 GGTGATTTGC--AAGAACGC-GTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAG 1003 Query 4266 TCTCAGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTATAATGTCAATGTTTATCGTCAT 4325 || |||||| | |||||||||| ||||| | | |||||| | |||||||| || Sbjct 1004 TCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAAT 1063 Query 4326 ATTCCTACTGTTCGTGATTCTATTATGACCTCTTGAT 4362 | || || ||| ||||| || ||||| || |||| Sbjct 1064 CTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 1100 Score = 174 bits (192), Expect = 6e-40 Identities = 226/307 (74%), Gaps = 14/307 (5%) Strand=Plus/Plus Query 5469 AGGAAAGGCAACCCGTGATTACTTGGCAGCGGCTTTCCCTGAGCTCAACCCATGGGAACG 5528 |||||||| || |||||||| | || || || || |||||||| || | ||||| || Sbjct 2084 AGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCG 2143 Query 5529 TGCTGGAGCTGATGCTTCCACTGCCGGGTTAGAGTCTTCCGC------TCAGAATCAACA 5582 |||||| |||||||||||| |||| || || || | ||| | |||||||| Sbjct 2144 TGCTGGTGCTGATGCTTCCTCTGCTGG--TATGGT-TGACGCCGGATTTGAGAATCAA-- 2198 Query 5583 AAAAGAGATGCTTAAAATGCAACTGGATAACCAGAAGGATATTGCCAAGATGCAGA-TGA 5641 |||||| | ||||||||||||||| || ||||| || |||||| ||||||| | ||| Sbjct 2199 -AAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGA 2257 Query 5642 ATAACAATTTGCAGATTGCTGGCATTCAGTCCGCTACATCTCGCCAGAATACGAAGGATT 5701 ||| | ||||||||||||||||||| || || || |||||||||||||| || Sbjct 2258 GACTCAAAAAG-AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACC 2316 Query 5702 CTGTTTATGCCCAGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTG 5761 || ||||| || |||||||||||| ||| | || ||||| || ||||||| Sbjct 2317 AGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTG 2376 Query 5762 CGTCCAT 5768 |||| || Sbjct 2377 CGTCTAT 2383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19385446902224