Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015-
05-13] 702 sequences; 27,513,354 total letters
Query= NC_012868.1
Length=6094
Score E
Sequences producing significant alignments: (Bits) Value
seq114 502 1e-138
>seq114
Length=3343
Score = 502 bits (556), Expect = 1e-138
Identities = 785/1117 (70%), Gaps = 22/1117 (2%)
Strand=Plus/Plus
Query 3251 CTCTAAGGTTGATTTTTTCACTTTCTATATTCCGCATCGCCATGTTTATGGTGACCAGTG 3310
||||| || || |||| ||||| ||| | || ||||| || ||||||||||| |||||
Sbjct 1 CTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTG 60
Query 3311 GATTCAATTTATGCGTGATGGTGTTGATGCCGCACCACTCCCTTCCGTTACTACTACTCA 3370
|||| | || ||| ||||||||| ||||| | || ||||| | |||| ||||||
Sbjct 61 GATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGG 120
Query 3371 GTATCCGGATGACGCTGGTTATGTTGGTACTATTGTTCCTAAGAGCAACCGTATTCCTAA 3430
||| || | || | || | |||| || ||| ||| | | ||| || |||||
Sbjct 121 TTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAA 180
Query 3431 GTTTTTGCATCAGTCTTATCTGAATATTTATAATAACTATTTCCGTGCGCCGTGGATGCC 3490
| |||| |||| |||| ||||||| ||||| |||||||| ||||||||||||||
Sbjct 181 GCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGATGCC 240
Query 3491 TGAGCGTACTGAAGCTAATCCTTCAAAT----TTAGACCGTGATGATTCTCGCTATGGAT 3546
||| ||||| || ||||| ||| ||| ||| | | |||||| |||| ||||| |
Sbjct 241 TGACCGTACCGAGGCTAACCCT---AATGAGCTTA-ATCAAGATGATGCTCGTTATGGTT 296
Query 3547 TCCGTTGCTGCCATCTTAAAACTATTTGGTCTGCTCCTCTTCCTCCGGAAACTAAGCTCG 3606
|||||||||||||||| |||| |||||| ||||||| |||||||| || ||| ||||
Sbjct 297 TCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTT 356
Query 3607 CTGAGCAAATGGGCATTGAAAGCAATTCCATTGATATTATGGGTTTGCAGGCCGCTTATG 3666
|| |||||| | | | || || ||||| ||||||||| |||| || |||||||
Sbjct 357 CTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATG 416
Query 3667 CGCAGCTTCATACTGAGCAGGAGCGTACTTATTTCATGCAGCGTTATCGTGATGTTATCT 3726
| | | |||||||| || || ||| ||| |||||||||||||| | ||||||||| |
Sbjct 417 CTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTT 476
Query 3727 CCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCACA 3786
| ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| |
Sbjct 477 CTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCT 536
Query 3787 CCGATTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTCGGACAGT 3846
| || ||||||| || || || || ||||| || || |||||| | || | || ||||
Sbjct 537 CTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGT 596
Query 3847 TTTCGGGTCGAGTCCAACAGACGTTTAAACACTCAGTGCCTCGATTCTTCGTGCCGGAGC 3906
|||| ||||| || |||||||| | |||||| || ||||| || ||||| || || ||||
Sbjct 597 TTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGC 656
Query 3907 ATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGGAGCATC 3966
|||| ||| | ||| | ||| ||||| || ||||||| || ||| ||
Sbjct 657 ATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTC 716
Query 3967 ATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCGGGTGACCCGGCTTTGA 4026
| || ||| | | | ||||||||||||||| |||| || ||||| | ||||
Sbjct 717 AGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGT 776
Query 4027 TTGGTAATTTGCCGCCACGTGAGATTTCTTATCAGGATCTTTTCCGTGATGGTCGTCCGG 4086
||| || |||||||| ||||| |||||| ||||| |||||||| |||| | ||
Sbjct 777 ATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGT 836
Query 4087 GCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGTACTCATCCGGATTATGTTAACT 4146
| ||| ||||| |||| ||| | ||||||||| | || |||||| ||
Sbjct 837 CTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTT-TCT 895
Query 4147 AC-AAGTATCAGTTACTTGAAGGTTTTCCGTTCCTTGATGATGCGCCCGGTACGACTAGT 4205
| ||||| | |||||||| || || ||| || | || ||| || |
Sbjct 896 CCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC---------CTTCT 946
Query 4206 GGTGATGACCTTCAGAAGGCTATTCTCATTGACCATAATGACTATAATGCCTGTTTCCAG 4265
|||||| | |||| || | || ||| ||| |||| ||| | |||||||||
Sbjct 947 GGTGATTTGC--AAGAACGC-GTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAG 1003
Query 4266 TCTCAGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTATAATGTCAATGTTTATCGTCAT 4325
|| |||||| | |||||||||| ||||| | | |||||| | |||||||| ||
Sbjct 1004 TCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAAT 1063
Query 4326 ATTCCTACTGTTCGTGATTCTATTATGACCTCTTGAT 4362
| || || ||| ||||| || ||||| || ||||
Sbjct 1064 CTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 1100
Score = 174 bits (192), Expect = 6e-40
Identities = 226/307 (74%), Gaps = 14/307 (5%)
Strand=Plus/Plus
Query 5469 AGGAAAGGCAACCCGTGATTACTTGGCAGCGGCTTTCCCTGAGCTCAACCCATGGGAACG 5528
|||||||| || |||||||| | || || || || |||||||| || | ||||| ||
Sbjct 2084 AGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCG 2143
Query 5529 TGCTGGAGCTGATGCTTCCACTGCCGGGTTAGAGTCTTCCGC------TCAGAATCAACA 5582
|||||| |||||||||||| |||| || || || | ||| | ||||||||
Sbjct 2144 TGCTGGTGCTGATGCTTCCTCTGCTGG--TATGGT-TGACGCCGGATTTGAGAATCAA-- 2198
Query 5583 AAAAGAGATGCTTAAAATGCAACTGGATAACCAGAAGGATATTGCCAAGATGCAGA-TGA 5641
|||||| | ||||||||||||||| || ||||| || |||||| ||||||| | |||
Sbjct 2199 -AAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGA 2257
Query 5642 ATAACAATTTGCAGATTGCTGGCATTCAGTCCGCTACATCTCGCCAGAATACGAAGGATT 5701
||| | ||||||||||||||||||| || || || |||||||||||||| ||
Sbjct 2258 GACTCAAAAAG-AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACC 2316
Query 5702 CTGTTTATGCCCAGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTG 5761
|| ||||| || |||||||||||| ||| | || ||||| || |||||||
Sbjct 2317 AGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTG 2376
Query 5762 CGTCCAT 5768
|||| ||
Sbjct 2377 CGTCTAT 2383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19385446902224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |