Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_024690.1 Length=2121 Score E Sequences producing significant alignments: (Bits) Value seq195 720 0.0 >seq195 Length=2182 Score = 720 bits (798), Expect = 0.0 Identities = 587/705 (83%), Gaps = 8/705 (1%) Strand=Plus/Minus Query 1355 GCAGCGCCA-GCAGACTTACCTCTCGGGTCTACAGTCCCCAATGGCTGCCTGATTCTCCC 1413 |||| || | ||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2182 GCAGAGCGACGCATACGTACCTCTCGGGTCTACAGTCCCCAATGGCTGCCTGATTCTCCC 2123 Query 1414 ACTCGGAGATCTCAGGATAGCGTTCTCTCTCCACAATGATGGGCGGCGCCTCGTATTCCG 1473 ||||||||||||||||||||||||||||| ||||| || ||| | | |||| || Sbjct 2122 ACTCGGAGATCTCAGGATAGCGTTCTCTCGCCACAGTGTAACTCGGTGACGTGTATGGCG 2063 Query 1474 GTTTCTCGTCGGGGTAATAAAAATTGGCGTATTCGATGATGCGCTGATTGGATAGCAACC 1533 | ||||| |||||||| |||| |||||||||||||| || ||||||||||||| || || Sbjct 2062 GCTTCTCCTCGGGGTAGTAAAGATTGGCGTATTCGAGTATTCGCTGATTGGATAACAGCC 2003 Query 1534 AATCTCTTGGAGCTTGTTGACGGACAGCCGACAGAAATGATTCTTTAGTGTCGCAGCTGA 1593 ||||||||||||| | | ||| || || |||||||||||||||||| ||||||||||| Sbjct 2002 AATCTCTTGGAGCCTTGTCACGTACTGCTGACAGAAATGATTCTTTATCGTCGCAGCTGA 1943 Query 1594 TGATATCAGCCCACTTATTTGAATTATCCCCGTCACATGAGCGAGCATCTGCTGGGGGCT 1653 |||||||| ||| ||||| || | | || |||| ||| || || ||| || | Sbjct 1942 TGATATCATGCCATTTATTCTGATCAGCTCCCTCACGTGATGAAGGCGTTGTTGGTGGTT 1883 Query 1654 CGCCGTGCTCAAGTCGGATGTCTCCATCCTTGCCGACATAATCGAAGACCTTGTGTGGAG 1713 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 1882 CGCCGTGCTCAAGTCGTATGTCTCCATCCTTCCCGACATAATCGAAGACCTTGTGTGGAG 1823 Query 1714 TTCGACGAATCGATTTAATATTGCCGTGAGCTCCAAAGTAGTCGAACGCAGTTGCCGAGT 1773 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1822 TTCGACGAATTGATTTAATATTTCCGTGAGCTCCGAAGTAGTCGAACGCAGTTGCCGAGT 1763 Query 1774 TGACAGTGACAATCTTGTCGAAGCCAAGATATATGTGGTAATGAATTCCTCCATCCGAAT 1833 ||| | ||||||||||||||||||||| ||| | ||||||||| |||||||||||| || Sbjct 1762 TGATACTGACAATCTTGTCGAAGCCAATATAAACGTGGTAATGGATTCCTCCATCCTCAT 1703 Query 1834 GGCGCTCTCGTCCGAGTCGACAGCATAAAGGATTTCCAAAATTCGCTGTGACACGTTCAA 1893 ||||||| ||||||||||| |||||| |||||| ||||||| | | ||||||||||| Sbjct 1702 GGCGCTCACGTCCGAGTCGTAAGCATAGAGGATTCCCAAAATCCTGTTGGACACGTTCAA 1643 Query 1894 GGAAAGGAGTTCCTGCGTCGAATTCATGTTGGAGGTGTTCGGGGACTTGTGGAAACGTAA 1953 ||||||||||||| |||||||||| ||||| | |||| |||||| ||||| || | Sbjct 1642 GGAAAGGAGTTCCAGCGTCGAATTGTCGTTGGGCATTTTCGTTGACTTGGGGAAAGGTGA 1583 Query 1954 TGATAAGATTTCTTGCTCTGACTTGGAATCGTCGAGGCAT-TTTAAGGAGTCGTTCACGT 2012 || |||||||| |||||| |||| ||| ||||| |||| || ||||||||| Sbjct 1582 CTATGAGATTTCTGGCTCTGCAGCGGAAGCGT---GGCATATTTATGGTCGCGTTCACGT 1526 Query 2013 GACGTGTGCAAATAGAGAGAGACTTGGCTAATATTATC-TCTCTC 2056 || | || ||||||| |||||| ||| |||||||||| |||||| Sbjct 1525 GATGGGT-CAAATAGGGAGAGAAGTGG-TAATATTATCTTCTCTC 1483 Score = 365 bits (404), Expect = 6e-98 Identities = 297/360 (83%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 912 ACAAATTGGATCCACCACATTGATTATGTGACAGTTGTTCATAAGCCAATCGTAGTCCAC 971 |||||||||||| |||||| |||||| |||||| | || ||||| ||||| || || Sbjct 479 ACAAATTGGATCTGTCACATTTATTATGAAACAGTTTTGCAACAGCCACTCGTAATCAAC 420 Query 972 CCCTTTAGCGAAGTGTGGGTCCTCGTTCATGCACATGATTGAGGGTTTGCCCCAGTAGAT 1031 |||||| || || ||||||| ||||||||||||||| || ||||| ||||| | ||| Sbjct 419 CCCTTTTTCGTAGAGTGGGTCAGTGTTCATGCACATGATCGATGGTTTCCCCCAATGGAT 360 Query 1032 CGTTCGCTTCTTTCGGTACTTGTCCGTGATGACGAATTGTTTTTGTGCGCCTAGCCACCC 1091 || | ||| || ||||| ||||| || ||||| |||||||| || || |||| ||| || Sbjct 359 TGTCCTCTTTTTGCGGTATTTGTCGGTAATGACAAATTGTTTCTGAGCCCCTAACCATCC 300 Query 1092 CTTGTATGAGTGGAAGTATTCGAATCCTCCCTGGATGTCGTCGAAGACGGCGTATTGACA 1151 |||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 299 CTTGTAAGAGTGAAAGAATTCGAATCCTCCCTGGAGGTCGTCGAAGACGGCGTATTGACA 240 Query 1152 ATCGTCGGAGAATTCGTCCATGTTGAATTGTAGGTTGAAGTACGCATGGTGTCCCAACGA 1211 | |||||||||||| |||||||||||||||| ||||||||| ||||| | ||| | Sbjct 239 ACTGTCGGAGAATTCATCCATGTTGAATTGTAAGTTGAAGTAGGCATGTTCTCCGAGTCC 180 Query 1212 TCTGGCGTATAGCGTCTTTCCGGTTCTTGTTGGTCCCCATAAAATGAGTGATTTAACTCT 1271 ||||||||| || |||||||| |||| || |||||||||| |||||| ||||||||||| Sbjct 179 TCTGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATGAGCGATTTAACTCT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6678374951826