Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_001330.1
Length=6087
Score E
Sequences producing significant alignments: (Bits) Value
seq37 682 0.0
>seq37
Length=5821
Score = 682 bits (756), Expect = 0.0
Identities = 1158/1673 (69%), Gaps = 71/1673 (4%)
Strand=Plus/Plus
Query 2736 CGTCATTGCTTATTATGTTCATCCCGTCAATGTACAAACAGCATGCCTCGTTATGGAAGG 2795
|||||||||||||||||||||||||||||| | ||||| || || ||| | ||||||||
Sbjct 3745 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 3804
Query 2796 CGCGGAGTTTAGCGAAAACATTATCAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCT 2855
||| || |||| ||||||||||| |||||||||||||| |||||||| |||||||| |
Sbjct 3805 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 3864
Query 2856 CTTCGCGTACACCCTGCGTATTAAAGCAGGATTCAAAGAAACTGTAATGGATGCCGAGGA 2915
||||||| ||| ||||| | |||||| || || | | | || || || ||
Sbjct 3865 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGA 3924
Query 2916 AAATGCTCGTCAGAAATTACGCGCAAATGGACTGAAGTGATATG--AAG--AAAGCACGT 2971
||| | ||||| |||||||| ||| | ||| ||| || || | ||| ||| ||||
Sbjct 3925 AAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGT 3984
Query 2972 -----CGTTCTCC-TAGTCGTC------------------------------GTAAAGGT 2995
|| || || | |||||| |||||||
Sbjct 3985 TCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGC 4044
Query 2996 GCTCGCCTCTGGTATGTAGGCGGTTCTCAGTTTTAATTATGGGCCCTTCGGGGCCTT--T 3053
||||| || ||||||||||| ||| || |||||||| || |||||| |||| |
Sbjct 4045 GCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACT 4104
Query 3054 TAAGGA--AATTCAAATGTCTAATGTACAAACTTCCGCTGAACGTGAAATTGTTGACCTC 3111
| |||| |||| ||||||||| | |||||| ||| || ||| ||||||
Sbjct 4105 TGAGGATAAATT---ATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTT 4161
Query 3112 TCTCATCTTGCCTT--TGACTGTGGCATGCTTGGTCGTCTGAAGACTGTTTCATGGACTC 3169
|| ||||||| ||| | ||| | || | |||||||||| | || ||||| ||||
Sbjct 4162 TCCCATCTTGGCTTCCTTGCTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTC 4219
Query 3170 CTGTTATCGCTGGCGATTCCTTTGAGCTTGATGCTGTTGGTGCTTTGCGTCTTTCCCCTC 3229
| |||||||||||||| ||||| ||| | || || ||||| ||| | |||||||| ||
Sbjct 4220 CGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCAT 4279
Query 3230 TGCGTCGTGGTTTAGCTATTGATTCTAAGGTTGATTTTTTCACCTTCTACATTCCGCATC 3289
|||||||||| | |||||||| |||| || || |||| || || || | || ||||
Sbjct 4280 TGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATC 4339
Query 3290 GTCATGTTTATGGCGACCAGTGGATTCAGTTTATGCGTGATGGTGTTAATGCTCAGCCTC 3349
|||| |||||||| || ||||||||| |||| ||| |||||||||||||| ||||
Sbjct 4340 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC 4399
Query 3350 TGCCTTCTGTTACTTGCAATCGCTATCCGGACCATGCTGGTTATGTAGGTACTATTGTTC 3409
| || |||||| | | | ||| |||||||| | || | | || || ||| |
Sbjct 4400 TCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACC 4459
Query 3410 CTG---CAAATAACCGTATTCCTAAGTTTTTGCATCAGAGCTATCTGAACATTTACAATA 3466
||| | ||||| || |||||| |||| |||| | ||| |||| || || || |
Sbjct 4460 CTGATACCAATAA---AATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACA 4516
Query 3467 ACTATTTCCGTGCCCCGTGGATGCCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATG 3526
||||||| || |||||||||||||| ||||||||||| ||||| | | ||||||
Sbjct 4517 ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATC 4576
Query 3527 AGGATGATGCTCGTTATCGCTTCCGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGC 3586
| ||||||||||||||| | |||||||||||||| || ||||| |||||| |||||||||
Sbjct 4577 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGC 4636
Query 3587 TGCCTCCGGAAACCAAATTGGCTGAAGAAATGGGTATTGAAAGCAATTCCATTGATATTA 3646
| ||||| || || | | || ||||| | | | || || ||||| ||||
Sbjct 4637 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTA 4696
Query 3647 TGGGTTTGCAAGCCGCTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTACTTTATGC 3706
||||| ||||||| |||||||| | | || ||||| || || ||| |||||| ||||
Sbjct 4697 TGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGC 4756
Query 3707 AGCGTTACCGTGATGTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACC 3766
||||||||| ||||||||| || ||||| ||| |||||| ||||| || || ||||
Sbjct 4757 AGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACC 4816
Query 3767 GACCGTTGCTTGTTATGCACACCGACTTCTGGGCTTCCGGTTACGACGTTGACGGTACCG 3826
| || || ||||| |||| | | | ||||||| || || || || ||||| || || |
Sbjct 4817 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTG 4876
Query 3827 ACCAATCTTCCCTTGGACAATTCTCTGGTCGAGTCCAGCAGACGTTTAAACACTCAGTGC 3886
||||| | || | || || || |||||||| || || ||||| | |||||| || ||||
Sbjct 4877 ACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC 4936
Query 3887 CGCGATTCTTCGTGCCTGAGCATGGTGTCATGATGACTTTGGCTCTGATTCGCTTCCCGC 3946
|||| ||||| || ||||||||||| ||| | ||| | || || |||| || ||||
Sbjct 4937 CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGC 4996
Query 3947 CTATCAGTCCGTTGGAGCACCATTATCTTGCTGGTAAGTCTCAGTTAACCTATACCGACC 4006
||| | ||| || || ||| | ||| | || || ||||||||
Sbjct 4997 CTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATA 5056
Query 4007 TTGCTGGCGACCCGGCTCTGATTGGTAACTTGCCTCCTCGCGAGATTAGTTATCGA-GAT 4065
||||||||||||| | | || ||| |||||||| || || || ||| ||| | |||
Sbjct 5057 TTGCTGGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGAAATT-TCTATGAAGGAT 5115
Query 4066 CTGTTCCGTGATGGTCGTTCTGGTATTAAGATTAAAGTTGCCGAGTCTATTTGGTATCGT 4125
| |||||| |||| ||| || ||| |||| |||| ||| | |||||||||
Sbjct 5116 GTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 5175
Query 4126 ACTCATCCTGATTACGTTAACTTTAAGTATCATGATTTGCATGGATTCCCGTTCCTTGAT 4185
| ||| || ||| | ||||| | | | || ||||| ||| || |
Sbjct 5176 TATGCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAG 5235
Query 4186 GATGCGCCTGGTACATCTACTGGTGATAATCTTCAGGAAGCTATCCTTGTTCGTCATCAG 4245
|| ||| || |||||| || | || ||| | ||| |||| || ||
Sbjct 5236 GAACCGC---------CTTCTGGTG---ATTTGCAAGAACGCGTACTTATTCGCCACCAT 5283
Query 4246 GACTATGATGCTTGCTTCCAGTCTCAGCAGTTGCTACAGTGGAACAAACAGGCTCGCTAT 4305
|| ||||| || |||||||| |||||| | |||||||| | |||| | | |
Sbjct 5284 GATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTT 5343
Query 4306 AACGTTAGTGTTTATCGCCATATGCCTACTGTACGTGATTCCATTATGACCTC 4358
|| || | ||||||||| || |||| || || ||||| || ||||| ||
Sbjct 5344 AATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTC 5396
Score = 253 bits (280), Expect = 8e-64
Identities = 179/205 (87%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 2560 CAGGCTAGTGCTGTTTTGGATGTTACTGAGGAAGATTTCGATTTTCTGACTGGTGATAAG 2619
|||||| ||| ||||||||| | || || || ||||||||||||||||| || | ||
Sbjct 3338 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 3397
Query 2620 ATTTGGATTGCTACCGACCGTAACCGTGCGCGTCGTTGTGTTGAGGCTTGTGTTTATGGA 2679
||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 3398 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 3457
Query 2680 ACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2739
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3458 ACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 3517
Query 2740 ATTGCTTATTATGTTCATCCCGTCA 2764
|||||||||||||||||||||||||
Sbjct 3518 ATTGCTTATTATGTTCATCCCGTCA 3542
Score = 174 bits (192), Expect = 6e-40
Identities = 280/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1293 GGCTGGTTCTTCGTATTTGATACGTTAACCCTTGCTGATGACCGTTTGCAGGCTTTTAAT 1352
|| ||||| |||| ||||| || | || | ||||| ||||| || |||| ||| ||
Sbjct 1856 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1915
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 1916 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1975
Query 1413 GAAGGTCGTTCGGTCAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || || ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 1976 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2035
Query 1473 TTTGGAGGTCAGC--ACGGCCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1530
| || | |||| | ||||||||||||| || | ||||| | ||||||| ||||
Sbjct 2036 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2093
Query 1531 CTTTGGGAAGTCATGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || |||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 2094 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2152
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTTCGCTATCAACAT 1649
| || | | |||||||||||| | || || || || |||||||| ||
Sbjct 2153 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2212
Query 1650 GACGCTTATTCCCGCAAAGGTTGGCTGTGGCCTGTTGA 1687
||||||| ||| || |||||| |||||||||||||
Sbjct 2213 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2250
Score = 82.4 bits (90), Expect = 3e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707
|||||||||| |||||||| || ||||| || || |||||||| || || ||||| |
Sbjct 747 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 806
Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762
| |||||||||||| ||| | || ||||| || ||||||||||||||
Sbjct 807 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19363191504396
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