Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_001730.1
Length=6089
Score E
Sequences producing significant alignments: (Bits) Value
seq37 764 0.0
>seq37
Length=5821
Score = 764 bits (846), Expect = 0.0
Identities = 1178/1671 (70%), Gaps = 70/1671 (4%)
Strand=Plus/Plus
Query 2735 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAGACAGCATGCCTCGTTATGGAAGG 2794
|||||||||||||||||||||||||||||||||||| || || || ||| | ||||||||
Sbjct 3745 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 3804
Query 2795 CGCGGAGTTTAGCGAAAACATTATTAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCT 2854
||| || |||| |||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 3805 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 3864
Query 2855 CTTCGCGTACACCCTGCGTATTAAGGCAGGATTCAAAGAAACTGTAATTGATGCCGAAGA 2914
||||||| ||| ||||| | |||||| || || | | | ||| || |||||
Sbjct 3865 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGA 3924
Query 2915 GAATGCTCGTCAGAAATTACGCGCAAATGGGTTGA---AATG---ATATGAAAAAAGCAC 2968
|| | ||||| |||||||| ||| | || ||| |||| | | | ||||| ||
Sbjct 3925 AAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAA--AC 3982
Query 2969 GT-----CGTTCTCC-TAGTCGTC------------------------------GTAAAG 2992
|| || || || | |||||| ||||||
Sbjct 3983 GTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAG 4042
Query 2993 GTGCTCGCCTCTGGTATGTAGGCGGTTCTCAGTTTTAATTAT-GGGCCTTCGGGCCC--- 3048
| ||||| || ||||||||||| ||| || |||||||| ||| |||||| |||
Sbjct 4043 GCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTA 4102
Query 3049 CTTAAGGATTATTAATGTCTAATGTACAAACTTCAGCTGAACGTGAAATTGTTGACCTCT 3108
||| ||||| | | ||||||||| | |||||| || || ||| |||||| |
Sbjct 4103 CTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTT 4162
Query 3109 CTCATCTTG-CTT--TTGACTGTGGCATGATTGGTCGCTTGAAAACTGTTTCATGGACTC 3165
| ||||||| ||| ||| ||| | || ||||||||| | | || ||||| ||||
Sbjct 4163 CCCATCTTGGCTTCCTTG-CTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTC 4219
Query 3166 CTGTTATCGCTGGCGATTCCTTTGAGCTTGATGCTGTTGGTGCTTTGCGTCTTTCTCCTC 3225
| |||||||||||||| ||||| ||| | || || ||||| ||| | |||||||||||
Sbjct 4220 CGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCAT 4279
Query 3226 TGCGTCGTGGTTTAGCCATTGATTCTAAGGTTGACTTTTTCACTTTCTATATTCCGCATC 3285
|||||||||| | || ||||| |||| || ||| |||| ||||| ||| | || ||||
Sbjct 4280 TGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATC 4339
Query 3286 GTCATGTTTATGGTGATCAGTGGATTCAATTTATGCGTGATGGTGTTGATGCTTCGCCGC 3345
|||| ||||||||||| ||||||||| | || ||| ||||||||| |||| | || |
Sbjct 4340 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC 4399
Query 3346 TTCCTTCCGTTACTACTACTAAGTATCCGGATGATGCTGGTTATGTTGGTACTATTGTTC 3405
| || | |||| |||||| ||| || |||| | || | |||| || ||| |
Sbjct 4400 TCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACC 4459
Query 3406 CTAAGAGCAACCGTATTCCTAAGTTTTTGCATCAGTCTTATCTGAATATTTATAATAACT 3465
|| | | ||| || |||||| |||| |||| |||| ||||||| ||||| ||||
Sbjct 4460 CTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACT 4519
Query 3466 ATTTCCGTGCGCCGTGGATGCCTGAGCGTACTGAAGCTAATCCT-TCAAACTTAGATCGT 3524
|||| ||||||||||||||||| ||||| || ||||| ||| | |||| |||
Sbjct 4520 ATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTA-ATCAA 4578
Query 3525 GATGATTCTCGTTATGGATTCCGTTGTTGCCATCTTAAAACTATTTGGTCTGCTCCTCTT 3584
|||||| |||||||||| |||||||| |||||||| |||| |||||| ||||||| |||
Sbjct 4579 GATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTT 4638
Query 3585 CCTCCGGAAACTAAGCTCGCTGAGCAAATGGGCATTGAAAGCAATTCCATTGATATTATG 3644
||||| || ||| |||| || |||||| | | | || || ||||| ||||||
Sbjct 4639 CCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATG 4698
Query 3645 GGTTTGCAGGCCGCTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTATTTTATGCAG 3704
||| |||| || |||||||| | | || ||||| || || ||| ||| || ||||||
Sbjct 4699 GGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAG 4758
Query 3705 CGTTACCGTGATGTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGA 3764
||||||| ||||||||| || ||||| ||| |||||| ||||| || || |||||
Sbjct 4759 CGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGT 4818
Query 3765 CCGTTGCTTGTTATGCATACCGATTTTTGGGCTTCCGGTTACGACGTTGACGGTACCGAC 3824
|| || ||||| |||| | || | ||||| || || || || ||||| || || |||
Sbjct 4819 CCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGAC 4878
Query 3825 CAATCTTCCCTTGGACAGTTTTCGGGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCG 3884
||| | || | || |||||||| || || ||||||||||| | |||||| || ||||||
Sbjct 4879 CAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCG 4938
Query 3885 CGATTCTTCGTGCCTGAGCATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCT 3944
|| ||||| || ||||||||||| ||| | ||| | ||| ||||| || ||||||
Sbjct 4939 CGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCT 4998
Query 3945 ATCAGTCCTTTGGAGCATCATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTT 4004
| || ||| ||| || ||| | | | ||||||||||||||| ||
Sbjct 4999 ACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATT 5058
Query 4005 GCTGGTGACCCGGCTTTGATTGGTAATTTGCCGCCGCGTGAGATTTCTTATCAGGACCTT 4064
||||| ||||| | |||| ||| || |||||||||||||| |||||| |||| ||
Sbjct 5059 GCTGGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTT 5118
Query 4065 TTCCGTGATGGTCGCCCGGGCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGTACT 4124
|||||| |||| || | ||| ||||| |||| ||| | ||||||||| |
Sbjct 5119 TTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTAT 5178
Query 4125 CATCCGGATTATGTTAACTAC-AAGTATCAGTTACTTGAGGGTTTCCCGTTCCTTGATGA 4183
|| |||||| || | ||||| | ||||| || ||||| ||| || | ||
Sbjct 5179 GCGCCTTCGTATGTT-TCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGA 5237
Query 4184 TGCGCCCGGTACGACTAGTGGTGATGACCTTCAGAAGGCTATTCTCATTGACCATAATGA 4243
||| || ||||||| | |||| || | || ||| ||| ||||
Sbjct 5238 ACCGC---------CTTCTGGTGATTTGC--AAGAACGC-GTACTTATTCGCCACCATGA 5285
Query 4244 CTATAATGCCTGTTTCCAGTCTCAGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTATAA 4303
||| | ||||||||||| |||||| | |||||||||| ||||| | | |||
Sbjct 5286 TTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAA 5345
Query 4304 TGTTAATGTTTATCGCCATATTCCTACTGTTCGTGATTCTATTATGACCTC 4354
||| | ||||||||| || | || || ||| ||||| || ||||| ||
Sbjct 5346 TGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTC 5396
Score = 239 bits (264), Expect = 2e-59
Identities = 176/205 (86%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 2559 CAGGCTAGTTCTGTTCTGGATATCACCGAGGAAGATTTTGACTTCCTGACTGGTGATAAG 2618
|||||| | | ||| ||||| | ||||| || ||||| || || ||||| || | ||
Sbjct 3338 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 3397
Query 2619 ATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTAGAGGCTTGTGTTTATGGA 2678
|||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct 3398 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 3457
Query 2679 ACGCTGGACTTTGTCGGCTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2738
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 3458 ACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 3517
Query 2739 ATTGCTTATTATGTTCATCCCGTCA 2763
|||||||||||||||||||||||||
Sbjct 3518 ATTGCTTATTATGTTCATCCCGTCA 3542
Score = 158 bits (174), Expect = 5e-35
Identities = 280/400 (70%), Gaps = 10/400 (3%)
Strand=Plus/Plus
Query 1292 GGCTGGTTCTTTGTGTTTGACACGTTGACCCTTGCCGATGACCGTTTGCAGGCATTCAAT 1351
|| ||||| | || |||||||| | || | || || ||||| || |||| || ||
Sbjct 1856 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1915
Query 1352 GAAAACCCCAATGCTCTTCGTGATTATTTTAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1411
|| || ||||||||| | ||||| |||||| | | ||||||| ||||| ||
Sbjct 1916 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1975
Query 1412 GAAGGTCGTTCGGTTAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1471
|| ||||| || ||| ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 1976 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2035
Query 1472 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1529
| || | |||| | || |||||||||| || | ||||| | ||||||| ||||
Sbjct 2036 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2093
Query 1530 CTTTGGGAAGTCATGACCCTAACTTCGGTCGCCCGGTACGTAATTATCGCCAGATTAACT 1589
|| || || ||||||||| || ||||| | |||||| ||| |||||| |||| |
Sbjct 2094 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2152
Query 1590 CG-TTCCGTGGCATGTGGCCCTATGGCTTTAC-GCA-ACCGATAGCCGTTCGTTATCAAC 1646
| || | | |||||| ||||| |||| | | || || || ||||| || |
Sbjct 2153 AGCTTGCAAAATACGTGGCCTTATGG--TTACAGTATGCCCATCGCAGTTCGCTACACGC 2210
Query 1647 ATGACGCTTATTCTCGCAAAGGTTGGTTATGGCCTGTTGA 1686
| ||||||| ||| || |||||||| |||||||||||
Sbjct 2211 AGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2250
Score = 87.8 bits (96), Expect = 7e-14
Identities = 241/360 (67%), Gaps = 32/360 (9%)
Strand=Plus/Plus
Query 5252 TGATGCTGGTATTCAGTCTGCTATTCAGGGTTCTAATGTTCCTCCTGCTGGTCAATTGCC 5311
||||||||||||| | ||||| ||||| || |||||||||||| ||| | | |||
Sbjct 367 TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG--GCC 424
Query 5312 --CGCTTCTAATACTTCTGGTGTTATGGCTGATGCTGGTAATATGATTCGTAATGCTGGT 5369
| || | | |||||||| ||||||| | |||||||| | || | | || |||
Sbjct 425 GTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAA-AGGACTTCT--TGAAGGT 481
Query 5370 AGAGCTTTGCTTGATGGTACGATTCAGGCTGGCTCTGATAAGGTTAAAGAGGCTCTTATT 5429
| | |||| | ||| || ||| | | | ||||||||| | ||| ||
Sbjct 482 A---CGTTGCAGGCTGGCAC--TTCTGCC-GTTTCTGATAAGTT-------GCTTGATTT 528
Query 5430 GATAAGTTGG--TTGGAGGTAATGATGCTAAAGACCGAGGAAAGGCAACCCGTGATTACT 5487
| ||||| |||| || || ||| || |||||||| || ||||||||
Sbjct 529 G----GTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATC 584
Query 5488 TGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCGTGCTGGAGCTGGTGCTTCCACTG 5547
| || || || || |||||||| || | |||||||||||||| |||| ||||||| |||
Sbjct 585 TTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTG 644
Query 5548 CCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAAAGAGATGCTTAAAATGCAACTGG 5604
| || | | || | | ||||| ||||||||| | ||||||||||||||
Sbjct 645 CTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAAAGAGCTTACTAAAATGCAACTGG 701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19369591501588
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