Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_007821.1
Length=6068
Score E
Sequences producing significant alignments: (Bits) Value
seq37 758 0.0
>seq37
Length=5821
Score = 758 bits (840), Expect = 0.0
Identities = 1179/1673 (70%), Gaps = 74/1673 (4%)
Strand=Plus/Plus
Query 2759 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGG 2818
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 3745 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 3804
Query 2819 CGCTGAGTTTACGGAAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCT 2878
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 3805 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 3864
Query 2879 CTTCGCGTACACCTTGCGTGTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAG 2937
||||||| ||||||||||| || ||| || || || |||| ||| ||||
Sbjct 3865 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAG 3923
Query 2938 AGAATGCTCGTCAGAAACTTCGTGCAAGTGGAGTAATGTAATATG--------AAGAAAG 2989
| || | ||||| ||| | |||||| ||||| ||||||| | || || |
Sbjct 3924 AAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACG 3983
Query 2990 CTC-GTCGTTC-CCCTTCTCGT---------------------------AAG---AAAGG 3017
|| | || || |||| |||| ||| |||||
Sbjct 3984 TTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGG 4043
Query 3018 CGCTCGTCTCTGGTATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCTA-- 3075
||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||
Sbjct 4044 CGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTAC 4103
Query 3076 -TAAGGATTCTTAAATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTT 3134
| ||||| | | |||| || | |||||| ||| || ||||| || || |||||||
Sbjct 4104 TTGAGGATAAATTA-TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTT 4162
Query 3135 CTCATCTGGTTTTTGATGCAGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTG 3194
| ||||| | || ||| || | ||||||||| | | |||| ||||| |
Sbjct 4163 CCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGG 4222
Query 3195 TTGTTGCAGGTGATTCTTTTGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTC 3254
|| | || || || || || ||| | || |||||||| | || ||||| || | |
Sbjct 4223 TTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGC 4282
Query 3255 GTCGTGGCCTTGCTGTTGACTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTC 3314
|||||||||||||| |||||||| ||| ||| | || || |||||||||||||||||||
Sbjct 4283 GTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTC 4342
Query 3315 ATGTATATGGTGAGCAGTGGATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGG 3374
| || |||||||| ||||||||| | || |||||| | |||||| |||| ||||| |
Sbjct 4343 ACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCC 4402
Query 3375 CCCCTGTTCAGTGCTCTCGCGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTC 3428
| ||||| | | || |||| ||| || || | ||||| || |||
Sbjct 4403 CGACTGTTAA---CACTACTGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTA 4456
Query 3429 CGTCTAGTAACTTAAAGGTTCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAA 3486
|| || | || | |||||| ||| || ||| ||||| |||| || || ||
Sbjct 4457 ACCCTGATACCAATAAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAA 4514
Query 3487 TAATTACTTTAAAGCTCCGTGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGA 3546
|| || |||||||| ||||||||| ||||| || | || ||||| | | | |
Sbjct 4515 CAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAA 4574
Query 3547 GGGTGAAGATGTTCGTTTTGGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCC 3606
|| |||| ||||| |||| | ||| || | | |||| ||||||||||||||
Sbjct 4575 TCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCC 4634
Query 3607 GCTTCCTCCGGATACTGAAACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACAT 3666
||||||||| || ||||| |||| ||| |||| |||| || ||||||||
Sbjct 4635 GCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACAT 4694
Query 3667 TATGGGTTTGCAGGCCGCTTATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCAT 3726
||||||| |||| || ||||||||| | || |||||||| || || ||||||||||||||
Sbjct 4695 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCAT 4754
Query 3727 GACTCGTTATCGTGATATTGTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAA 3786
| ||||| | |||| || || ||||||||||| || |||||||| || || ||
Sbjct 4755 GCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAA 4814
Query 3787 TCGTCCTTTGCTTGTTATGCATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCAC 3846
|||||||| ||||| |||| ||| | ||||||| || |||||||||||||| || ||
Sbjct 4815 CCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAAC 4874
Query 3847 CGACCAAAGCTCTCTCGGTCAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGT 3906
||||||| || | || ||||| || |||||||| || ||||| | ||| ||||| ||
Sbjct 4875 TGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGT 4934
Query 3907 ACCGCGATTCTTCTGCCCTGAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCC 3966
||||| ||||| |||||||||||||||||||| || || || | || || || ||
Sbjct 4935 GCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC 4994
Query 3967 GCCGACT--CATGAAATGGAGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACT 4024
||| ||| | ||| ||||| || ||| | | ||||| | ||||||||||||
Sbjct 4995 GCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACC 5052
Query 4025 GATTTGGCTTGTGACCCTGCTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTC 4083
||| | ||| | ||||||| |||| ||||| |||||||| || ||||| || ||||
Sbjct 5053 GATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAA 5111
Query 4084 TCAGTTCTTCCATTCTGGAAGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTA 4143
| | |||| |||||| | | | ||||||||||| ||||| |||||||||||
Sbjct 5112 GGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTA 5171
Query 4144 TCG-CATGCAGCCTGATCG--CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTT 4200
||| |||| |||| ||| ||| | | ||| || |||||| || || || ||
Sbjct 5172 TCGTTATGC-GCCT--TCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATT 5228
Query 4201 CTATAGCGCGATTCCGTCTGATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTA 4260
| | | || |||| |||| | | | ||||| || || || | ||
Sbjct 5229 CATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTA 5288
Query 4261 CGATGAGGTTTTCCAGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTG 4320
|| || ||||||||| | ||| | ||| ||||||| ||| ||| ||||||
Sbjct 5289 TGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGT 5348
Query 4321 CACCATTTATCGTAATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373
||| ||||||| ||| |||||||||||||||| || || ||||| || ||||
Sbjct 5349 GACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 5401
Score = 269 bits (298), Expect = 1e-68
Identities = 184/207 (89%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640
|||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | |
Sbjct 3336 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 3395
Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700
|| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||
Sbjct 3396 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 3455
Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760
| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3456 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 3515
Query 2761 TCATTGCTTATTATGTTCATCCCGTCA 2787
|||||||||||||||||||||||||||
Sbjct 3516 TCATTGCTTATTATGTTCATCCCGTCA 3542
Score = 165 bits (182), Expect = 3e-37
Identities = 278/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352
|| |||||| |||| ||||| || | || | ||||| || || || |||| ||| ||
Sbjct 1856 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1915
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 1916 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1975
Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| |||
Sbjct 1976 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2035
Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530
| ||| |||| | || |||||||||| |||| ||||| | ||||||| ||||
Sbjct 2036 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2093
Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || ||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 2094 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2152
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649
| || | | |||||||||||| | || || || || || ||||| ||
Sbjct 2153 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2212
Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687
|| |||| ||| || ||||||||||||||||||||
Sbjct 2213 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2250
Score = 156 bits (172), Expect = 2e-34
Identities = 282/407 (69%), Gaps = 18/407 (4%)
Strand=Plus/Plus
Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502
||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| |
Sbjct 561 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 620
Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559
||||||| |||| ||||||| ||| || ||| |||| ||||||| ||
Sbjct 621 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 677
Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619
| ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | |
Sbjct 678 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 737
Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679
| | |||||||||| |||||||| || ||||| ||| |||||||||| || |
Sbjct 738 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 797
Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739
| ||||| || |||||||||||| | | | || ||||||| || ||||||| ||
Sbjct 798 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 857
Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794
|||| | | ||||| | ||| | || | | |||| | || || |||||| |
Sbjct 858 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 914
Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840
|||| ||||||| ||||| | |||||||| |||| || |||
Sbjct 915 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19302391531072
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