Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24] 39 sequences; 13,025,060 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq37 758 0.0 >seq37 Length=5821 Score = 758 bits (840), Expect = 0.0 Identities = 1179/1673 (70%), Gaps = 74/1673 (4%) Strand=Plus/Plus Query 2759 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGG 2818 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 3745 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 3804 Query 2819 CGCTGAGTTTACGGAAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCT 2878 |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 3805 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 3864 Query 2879 CTTCGCGTACACCTTGCGTGTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAG 2937 ||||||| ||||||||||| || ||| || || || |||| ||| |||| Sbjct 3865 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAG 3923 Query 2938 AGAATGCTCGTCAGAAACTTCGTGCAAGTGGAGTAATGTAATATG--------AAGAAAG 2989 | || | ||||| ||| | |||||| ||||| ||||||| | || || | Sbjct 3924 AAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACG 3983 Query 2990 CTC-GTCGTTC-CCCTTCTCGT---------------------------AAG---AAAGG 3017 || | || || |||| |||| ||| ||||| Sbjct 3984 TTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGG 4043 Query 3018 CGCTCGTCTCTGGTATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCTA-- 3075 ||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||| Sbjct 4044 CGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTAC 4103 Query 3076 -TAAGGATTCTTAAATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTT 3134 | ||||| | | |||| || | |||||| ||| || ||||| || || ||||||| Sbjct 4104 TTGAGGATAAATTA-TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTT 4162 Query 3135 CTCATCTGGTTTTTGATGCAGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTG 3194 | ||||| | || ||| || | ||||||||| | | |||| ||||| | Sbjct 4163 CCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGG 4222 Query 3195 TTGTTGCAGGTGATTCTTTTGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTC 3254 || | || || || || || ||| | || |||||||| | || ||||| || | | Sbjct 4223 TTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGC 4282 Query 3255 GTCGTGGCCTTGCTGTTGACTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTC 3314 |||||||||||||| |||||||| ||| ||| | || || ||||||||||||||||||| Sbjct 4283 GTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTC 4342 Query 3315 ATGTATATGGTGAGCAGTGGATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGG 3374 | || |||||||| ||||||||| | || |||||| | |||||| |||| ||||| | Sbjct 4343 ACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCC 4402 Query 3375 CCCCTGTTCAGTGCTCTCGCGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTC 3428 | ||||| | | || |||| ||| || || | ||||| || ||| Sbjct 4403 CGACTGTTAA---CACTACTGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTA 4456 Query 3429 CGTCTAGTAACTTAAAGGTTCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAA 3486 || || | || | |||||| ||| || ||| ||||| |||| || || || Sbjct 4457 ACCCTGATACCAATAAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAA 4514 Query 3487 TAATTACTTTAAAGCTCCGTGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGA 3546 || || |||||||| ||||||||| ||||| || | || ||||| | | | | Sbjct 4515 CAACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAA 4574 Query 3547 GGGTGAAGATGTTCGTTTTGGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCC 3606 || |||| ||||| |||| | ||| || | | |||| |||||||||||||| Sbjct 4575 TCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCC 4634 Query 3607 GCTTCCTCCGGATACTGAAACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACAT 3666 ||||||||| || ||||| |||| ||| |||| |||| || |||||||| Sbjct 4635 GCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACAT 4694 Query 3667 TATGGGTTTGCAGGCCGCTTATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCAT 3726 ||||||| |||| || ||||||||| | || |||||||| || || |||||||||||||| Sbjct 4695 TATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCAT 4754 Query 3727 GACTCGTTATCGTGATATTGTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAA 3786 | ||||| | |||| || || ||||||||||| || |||||||| || || || Sbjct 4755 GCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAA 4814 Query 3787 TCGTCCTTTGCTTGTTATGCATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCAC 3846 |||||||| ||||| |||| ||| | ||||||| || |||||||||||||| || || Sbjct 4815 CCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAAC 4874 Query 3847 CGACCAAAGCTCTCTCGGTCAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGT 3906 ||||||| || | || ||||| || |||||||| || ||||| | ||| ||||| || Sbjct 4875 TGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGT 4934 Query 3907 ACCGCGATTCTTCTGCCCTGAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCC 3966 ||||| ||||| |||||||||||||||||||| || || || | || || || || Sbjct 4935 GCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC 4994 Query 3967 GCCGACT--CATGAAATGGAGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACT 4024 ||| ||| | ||| ||||| || ||| | | ||||| | |||||||||||| Sbjct 4995 GCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACC 5052 Query 4025 GATTTGGCTTGTGACCCTGCTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTC 4083 ||| | ||| | ||||||| |||| ||||| |||||||| || ||||| || |||| Sbjct 5053 GATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAA 5111 Query 4084 TCAGTTCTTCCATTCTGGAAGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTA 4143 | | |||| |||||| | | | ||||||||||| ||||| ||||||||||| Sbjct 5112 GGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTA 5171 Query 4144 TCG-CATGCAGCCTGATCG--CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTT 4200 ||| |||| |||| ||| ||| | | ||| || |||||| || || || || Sbjct 5172 TCGTTATGC-GCCT--TCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATT 5228 Query 4201 CTATAGCGCGATTCCGTCTGATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTA 4260 | | | || |||| |||| | | | ||||| || || || | || Sbjct 5229 CATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTA 5288 Query 4261 CGATGAGGTTTTCCAGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTG 4320 || || ||||||||| | ||| | ||| ||||||| ||| ||| |||||| Sbjct 5289 TGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGT 5348 Query 4321 CACCATTTATCGTAATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373 ||| ||||||| ||| |||||||||||||||| || || ||||| || |||| Sbjct 5349 GACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 5401 Score = 269 bits (298), Expect = 1e-68 Identities = 184/207 (89%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640 |||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | | Sbjct 3336 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 3395 Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700 || |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| Sbjct 3396 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 3455 Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760 | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 3456 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 3515 Query 2761 TCATTGCTTATTATGTTCATCCCGTCA 2787 ||||||||||||||||||||||||||| Sbjct 3516 TCATTGCTTATTATGTTCATCCCGTCA 3542 Score = 165 bits (182), Expect = 3e-37 Identities = 278/398 (70%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352 || |||||| |||| ||||| || | || | ||||| || || || |||| ||| || Sbjct 1856 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1915 Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412 || || ||||||||| | ||||| ||||| | | ||||||| ||||| || Sbjct 1916 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1975 Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472 || ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| ||| Sbjct 1976 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2035 Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530 | ||| |||| | || |||||||||| |||| ||||| | ||||||| |||| Sbjct 2036 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2093 Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590 || || || ||||||||||| ||||| |||||| ||| |||||| |||| | Sbjct 2094 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2152 Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649 | || | | |||||||||||| | || || || || || ||||| || Sbjct 2153 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2212 Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687 || |||| ||| || |||||||||||||||||||| Sbjct 2213 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2250 Score = 156 bits (172), Expect = 2e-34 Identities = 282/407 (69%), Gaps = 18/407 (4%) Strand=Plus/Plus Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502 ||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| | Sbjct 561 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 620 Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559 ||||||| |||| ||||||| ||| || ||| |||| ||||||| || Sbjct 621 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 677 Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619 | ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | | Sbjct 678 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 737 Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679 | | |||||||||| |||||||| || ||||| ||| |||||||||| || | Sbjct 738 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 797 Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739 | ||||| || |||||||||||| | | | || ||||||| || ||||||| || Sbjct 798 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 857 Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794 |||| | | ||||| | ||| | || | | |||| | || || |||||| | Sbjct 858 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 914 Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840 |||| ||||||| ||||| | |||||||| |||| || ||| Sbjct 915 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19302391531072