Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000982675.1_202014-10-24]
39 sequences; 13,025,060 total letters
Query= NC_012868.1
Length=6094
Score E
Sequences producing significant alignments: (Bits) Value
seq37 773 0.0
>seq37
Length=5821
Score = 773 bits (856), Expect = 0.0
Identities = 1184/1679 (71%), Gaps = 73/1679 (4%)
Strand=Plus/Plus
Query 2735 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAGACAGCATGCCTCGTTATGGAAGG 2794
|||||||||||||||||||||||||||||||||||| || || || ||| | ||||||||
Sbjct 3745 CGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGG 3804
Query 2795 CGCGGAGTTTAGCGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAACGCCGCTGAGCT 2854
||| || |||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 3805 CGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT 3864
Query 2855 CTTCGCGTACACCCTGCGTATTAAGGCAGGATTCAAAGAAACTGTAATTGATGCCGAGGA 2914
||||||| ||| ||||| | |||||| || || | | | ||| || || ||
Sbjct 3865 GTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGA 3924
Query 2915 AAATGCTCGTCAGAAATTACGCGCAAATGGACTGA---AATGATATGAAG--AAAGCACG 2969
||| | ||||| |||||||| ||| | ||| ||| |||| | | ||| ||| |||
Sbjct 3925 AAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATG-TCTAAAGGTAAAAAACG 3983
Query 2970 T-----CGTTCTCC-TAGTCGTC------------------------------GTAAAGG 2993
| || || || | |||||| |||||||
Sbjct 3984 TTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGG 4043
Query 2994 TGCCCGCCTTTGGTATGTAGGCGGTTCTCAGTTTTAATTATGAGCCCTTCGGGGCTCT-- 3051
|| || |||||||||||||| ||| || |||||||| | |||||| | |
Sbjct 4044 CGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTAC 4103
Query 3052 TTAAGGA-AAATTAAATGTCTAATGTACAAACTTCCGCTGAACGTGAAATTGTTGACCTT 3110
|| |||| |||||| |||||||| | |||||| ||| || ||| |||||||
Sbjct 4104 TTGAGGATAAATTA--TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTT 4161
Query 3111 TCTCATCTTGCCTT--TGACTGTGGCATGATTGGTCGTTTGAAAACTGTTTCATGGACTC 3168
|| ||||||| ||| | ||| | || |||||||||| | | || ||||| ||||
Sbjct 4162 TCCCATCTTGGCTTCCTTGCTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTC 4219
Query 3169 CTGTTATTGCTGGCGATTCCTTTGAGCTTGATGCTGTTGGCGCTTTGCGTCTTTCTCCTC 3228
| ||||| |||||||| ||||| ||| | || || ||||||||| | |||||||||||
Sbjct 4220 CGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCAT 4279
Query 3229 TGCGTCGTGGTTTAGCTATTGACTCTAAGGTTGATTTTTTCACTTTCTATATTCCGCATC 3288
|||||||||| | ||||||||||||| || || |||| ||||| ||| | || ||||
Sbjct 4280 TGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATC 4339
Query 3289 GCCATGTTTATGGTGACCAGTGGATTCAATTTATGCGTGATGGTGTTGATGCCGCACCAC 3348
| || ||||||||||| ||||||||| | || ||| ||||||||| ||||| | || |
Sbjct 4340 GTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTC 4399
Query 3349 TCCCTTCCGTTACTACTACTCAGTATCCGGATGACGCTGGTTATGTTGGTACTATTGTTC 3408
|||| | |||| |||||| ||| || | || | || | |||| || ||| |
Sbjct 4400 TCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACC 4459
Query 3409 CTAAGAGCAACCGTATTCCTAAGTTTTTGCATCAGTCTTATCTGAATATTTATAATAACT 3468
|| | | ||| || |||||| |||| |||| |||| ||||||| ||||| ||||
Sbjct 4460 CTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACT 4519
Query 3469 ATTTCCGTGCGCCGTGGATGCCTGAGCGTACTGAAGCTAATCCTTCAAAT----TTAGAC 3524
|||| ||||||||||||||||| ||||| || ||||| ||| ||| ||| |
Sbjct 4520 ATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCT---AATGAGCTTA-AT 4575
Query 3525 CGTGATGATTCTCGCTATGGATTCCGTTGCTGCCATCTTAAAACTATTTGGTCTGCTCCT 3584
| |||||| |||| ||||| ||||||||||||||||| |||| |||||| |||||||
Sbjct 4576 CAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCG 4635
Query 3585 CTTCCTCCGGAAACTAAGCTCGCTGAGCAAATGGGCATTGAAAGCAATTCCATTGATATT 3644
|||||||| || ||| |||| || |||||| | | | || || ||||| |||
Sbjct 4636 CTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATT 4695
Query 3645 ATGGGTTTGCAGGCCGCTTATGCGCAGCTTCATACTGAGCAGGAGCGTACTTATTTCATG 3704
|||||| |||| || |||||||| | | |||||||| || || ||| ||| ||||||
Sbjct 4696 ATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATG 4755
Query 3705 CAGCGTTATCGTGATGTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAAC 3764
|||||||| | ||||||||| || ||||| ||| |||||| ||||| || || |||
Sbjct 4756 CAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAAC 4815
Query 3765 CGACCGTTGCTTGTTATGCACACCGATTTCTGGGCTTCCGGTTACGACGTTGACGGTACC 3824
|| || || ||||| |||| | | || ||||||| || || || || ||||| || ||
Sbjct 4816 CGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACT 4875
Query 3825 GACCAATCTTCCCTCGGACAGTTTTCGGGTCGAGTCCAACAGACGTTTAAACACTCAGTG 3884
|||||| | || | || |||||||| ||||| || |||||||| | |||||| || |||
Sbjct 4876 GACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTG 4935
Query 3885 CCTCGATTCTTCGTGCCGGAGCATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCG 3944
|| || ||||| || || |||||||| ||| | ||| | ||| ||||| || |||
Sbjct 4936 CCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCG 4995
Query 3945 CCTATCAGTCCTTTGGAGCATCATTATCTTGTTGGTCGTAATAATTTGACTTATACCGAC 4004
|||| || ||| ||| || ||| | | | |||||||||||||||
Sbjct 4996 CCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGAT 5055
Query 4005 CTTGCGGGTGACCCGGCTTTGATTGGTAATTTGCCGCCACGTGAGATTTCTTATCAGGAT 4064
|||| || ||||| | |||| ||| || |||||||| ||||| |||||| |||||
Sbjct 5056 ATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGAT 5115
Query 4065 CTTTTCCGTGATGGTCGTCCGGGCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGT 4124
|||||||| |||| | || | ||| ||||| |||| ||| | |||||||||
Sbjct 5116 GTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 5175
Query 4125 ACTCATCCGGATTATGTTAACTAC-AAGTATCAGTTACTTGAAGGTTTTCCGTTCCTTGA 4183
| || |||||| || | ||||| | |||||||| || || ||| || |
Sbjct 5176 TATGCGCCTTCGTATGTT-TCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCA 5234
Query 4184 TGATGCGCCCGGTACGACTAGTGGTGATGACCTTCAGAAGGCTATTCTCATTGACCATAA 4243
|| ||| || ||||||| | |||| || | || ||| ||| |
Sbjct 5235 GGAACCGC---------CTTCTGGTGATTTGC--AAGAACGC-GTACTTATTCGCCACCA 5282
Query 4244 TGACTATAATGCCTGTTTCCAGTCTCAGCAGTTGCTTCAGTGGAATAATCAGGCTCGTTA 4303
||| ||| | ||||||||||| |||||| | |||||||||| ||||| | |
Sbjct 5283 TGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATT 5342
Query 4304 TAATGTCAATGTTTATCGTCATATTCCTACTGTTCGTGATTCTATTATGACCTCTTGAT 4362
|||||| | |||||||| || | || || ||| ||||| || ||||| || ||||
Sbjct 5343 TAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 5401
Score = 230 bits (254), Expect = 9e-57
Identities = 175/207 (85%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 2557 TTCAGGCTAGCGCTGTTCTGGATATCACTGAGGAAGATTTCGACTTCCTGACTGGTGATA 2616
|||||||| || ||| ||||| | || || || |||||||| || ||||| || | |
Sbjct 3336 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 3395
Query 2617 AGATTTGGATTGCCACCGACCGCAACCGTGCGCGTCGCTGTGTGGAGGCTTGTGTTTATG 2676
| |||||||||| || |||||| ||||| |||||||| || |||||||| |||||||
Sbjct 3396 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 3455
Query 2677 GAGCGCTGGACTTTGTCGGCTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2736
| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct 3456 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 3515
Query 2737 TCATTGCTTATTATGTTCATCCCGTCA 2763
|||||||||||||||||||||||||||
Sbjct 3516 TCATTGCTTATTATGTTCATCCCGTCA 3542
Score = 178 bits (196), Expect = 5e-41
Identities = 281/398 (71%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1292 GGCTGGTTCTTTGTATTTGATACACTGACCCTTGCTGATGACCGTTTGCAGGCTTTTAAT 1351
|| ||||| | || ||||| || || || | ||||| ||||| || |||| ||| ||
Sbjct 1856 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1915
Query 1352 GAAAACCCCAATGCTCTTCGTGATTATTTTAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1411
|| || ||||||||| | ||||| |||||| | | ||||||| ||||| ||
Sbjct 1916 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1975
Query 1412 GAAGGTCGTTCGGTTAAGGATTCCTACAACGACTGCTATCGTTATCTTTGTGTGCCGGAG 1471
|| ||||| || ||| ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 1976 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2035
Query 1472 TTTGGAGGTCAGC--ACGGCCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1529
| || | |||| | ||||||||||||| || | ||||| | ||||||| ||||
Sbjct 2036 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2093
Query 1530 CTTTGGGAAGTCACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1589
|| || || ||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 2094 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2152
Query 1590 CG-TTCCGTGGCATGTGGCCCTATGGCTTCACGCAACCGATAGCTGTTCGCTATCAACAT 1648
| || | | |||||| ||||| | || || || || |||||||| ||
Sbjct 2153 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2212
Query 1649 GACGCTTATTCTCGTAAAGGTTGGCTGTGGCCTGTTGA 1686
||||||| ||| ||| |||||| |||||||||||||
Sbjct 2213 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2250
Score = 174 bits (192), Expect = 6e-40
Identities = 226/307 (74%), Gaps = 14/307 (5%)
Strand=Plus/Plus
Query 5469 AGGAAAGGCAACCCGTGATTACTTGGCAGCGGCTTTCCCTGAGCTCAACCCATGGGAACG 5528
|||||||| || |||||||| | || || || || |||||||| || | ||||| ||
Sbjct 562 AGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCG 621
Query 5529 TGCTGGAGCTGATGCTTCCACTGCCGGGTTAGAGTCTTCCGC------TCAGAATCAACA 5582
|||||| |||||||||||| |||| || || || | ||| | ||||||||
Sbjct 622 TGCTGGTGCTGATGCTTCCTCTGCTGG--TATGGT-TGACGCCGGATTTGAGAATCAA-- 676
Query 5583 AAAAGAGATGCTTAAAATGCAACTGGATAACCAGAAGGATATTGCCAAGATGCAGA-TGA 5641
|||||| | ||||||||||||||| || ||||| || |||||| ||||||| | |||
Sbjct 677 -AAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGA 735
Query 5642 ATAACAATTTGCAGATTGCTGGCATTCAGTCCGCTACATCTCGCCAGAATACGAAGGATT 5701
||| | ||||||||||||||||||| || || || |||||||||||||| ||
Sbjct 736 GACTCAAAAAG-AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACC 794
Query 5702 CTGTTTATGCCCAGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTG 5761
|| ||||| || |||||||||||| ||| | || ||||| || |||||||
Sbjct 795 AGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTG 854
Query 5762 CGTCCAT 5768
|||| ||
Sbjct 855 CGTCTAT 861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19385591494568
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