Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007765.1_202016-02-08]
125 sequences; 9,357,276 total letters
Query= NC_007821.1
Length=6068
Score E
Sequences producing significant alignments: (Bits) Value
seq54 975 0.0
>seq54
Length=5386
Score = 975 bits (1080), Expect = 0.0
Identities = 1335/1851 (72%), Gaps = 74/1851 (4%)
Strand=Plus/Minus
Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640
|||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | |
Sbjct 4755 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 4696
Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700
|| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||
Sbjct 4695 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 4636
Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760
| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 4635 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 4576
Query 2761 TCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGGCG 2820
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 4575 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCG 4516
Query 2821 CTGAGTTTACGGAAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCTCT 2880
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct 4515 CTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGT 4456
Query 2881 TCGCGTACACCTTGCGTGTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAGAG 2939
|||||| ||||||||||| || ||| || || || |||| ||| |||||
Sbjct 4455 TCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAGAA 4397
Query 2940 AATGCTCGTCAGAAACTTCGTGCA-----AGTGGAGTAATGT---AATATGAAGAAAGCT 2991
|| | ||||| ||| | |||||| |||| ||||||| || | || || | |
Sbjct 4396 AACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTT 4337
Query 2992 C-GTCGTTC-CCCTTCTCGT----------------------AAG--------AAAGGCG 3019
| | || || |||| |||| ||| |||||||
Sbjct 4336 CTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCG 4277
Query 3020 CTCGTCTCTGGTATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCT---AT 3076
||||||| ||||||||||| ||| ||||||||||| ||||||||||||||| |
Sbjct 4276 CTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTT 4217
Query 3077 AAGGATTCTTAAATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTTCT 3136
||||| | ||||| || | |||||| ||| || ||||| || || ||||||||
Sbjct 4216 GAGGATAAAT-TATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCC 4158
Query 3137 CATCTGGTTTTTGATGCAGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTGTT 3196
||||| | || ||| || | ||||||||| | | |||| ||||| |||
Sbjct 4157 CATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTT 4098
Query 3197 GTTGCAGGTGATTCTTTTGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTCGT 3256
| || || || || || ||| | || |||||||| | || ||||| || | |||
Sbjct 4097 ATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGT 4038
Query 3257 CGTGGCCTTGCTGTTGACTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCAT 3316
|||||||||||| |||||||| ||| ||| | || || ||||||||||||||||||||
Sbjct 4037 CGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCAC 3978
Query 3317 GTATATGGTGAGCAGTGGATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCC 3376
|| |||||||| ||||||||| | || |||||| | |||||| |||| ||||| | |
Sbjct 3977 GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCG 3918
Query 3377 CCTGTTCAGTGCTCTCGCGGTTGGGATAGTGCTCA------GTATCTTGCTACTATTCCG 3430
||||| | | || |||| ||| || || | ||||| || |||
Sbjct 3917 ACTGTTAA---CACTACTGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAAC 3864
Query 3431 TCTAGTAACTTAAAGGTTCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATA 3488
|| || | || | |||||| ||| || ||| ||||| |||| || || || |
Sbjct 3863 CCTGATACCAATAAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACA 3806
Query 3489 ATTACTTTAAAGCTCCGTGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGG 3548
| || |||||||| ||||||||| ||||| || | || ||||| | | | |
Sbjct 3805 ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATC 3746
Query 3549 GTGAAGATGTTCGTTTTGGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGC 3608
|| |||| ||||| |||| | ||| || | | |||| ||||||||||||||||
Sbjct 3745 AAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGC 3686
Query 3609 TTCCTCCGGATACTGAAACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTA 3668
||||||| || ||||| |||| ||| |||| |||| || ||||||||||
Sbjct 3685 TTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTA 3626
Query 3669 TGGGTTTGCAGGCCGCTTATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGA 3728
||||| |||| || ||||||||| | || |||||||| || || |||||||||||||||
Sbjct 3625 TGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGC 3566
Query 3729 CTCGTTATCGTGATATTGTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATC 3788
||||| | |||| || || ||||||||||| || |||||||| || || || |
Sbjct 3565 AGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACC 3506
Query 3789 GTCCTTTGCTTGTTATGCATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCG 3848
||||||| ||||| |||| ||| | ||||||| || |||||||||||||| || || |
Sbjct 3505 GTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTG 3446
Query 3849 ACCAAAGCTCTCTCGGTCAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTAC 3908
|||||| || | || ||||| || |||||||| || ||||| | ||| ||||| || |
Sbjct 3445 ACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC 3386
Query 3909 CGCGATTCTTCTGCCCTGAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGC 3968
|||| ||||| |||||||||||||||||||| || || || | || || || ||||
Sbjct 3385 CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGC 3326
Query 3969 CGACT--CATGAAATGGAGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGA 4026
| ||| | ||| ||||| || ||| | | ||||| | |||||||||||| ||
Sbjct 3325 CTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGA 3268
Query 4027 TTTGGCTTGTGACCCTGCTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTC 4085
| | ||| | ||||||| |||| ||||| |||||||| || ||||| || ||||
Sbjct 3267 TATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGG 3209
Query 4086 AGTTCTTCCATTCTGGAAGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATC 4145
| | |||| |||||| | | | ||||||||||| ||||| |||||||||||||
Sbjct 3208 ATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATC 3149
Query 4146 G-CATGCAGCCTGATCG--CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCT 4202
| |||| |||| ||| ||| | | ||| || |||||| || || || |||
Sbjct 3148 GTTATGC-GCCT--TCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCA 3092
Query 4203 ATAGCGCGATTCCGTCTGATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACG 4262
| | || |||| |||| | | | ||||| || || || | || |
Sbjct 3091 TTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATG 3032
Query 4263 ATGAGGTTTTCCAGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCA 4322
| || ||||||||| | ||| | ||| ||||||| ||| ||| |||||| |
Sbjct 3031 ACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGA 2972
Query 4323 CCATTTATCGTAATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373
|| ||||||| ||| |||||||||||||||| || || ||||| || ||||
Sbjct 2971 CCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 2921
Score = 165 bits (182), Expect = 3e-37
Identities = 278/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352
|| |||||| |||| ||||| || | || | ||||| || || || |||| ||| ||
Sbjct 643 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 584
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 583 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 524
Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| |||
Sbjct 523 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 464
Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530
| ||| |||| | || |||||||||| |||| ||||| | ||||||| ||||
Sbjct 463 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 406
Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || ||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 405 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 347
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649
| || | | |||||||||||| | || || || || || ||||| ||
Sbjct 346 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 287
Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687
|| |||| ||| || ||||||||||||||||||||
Sbjct 286 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 249
Score = 156 bits (172), Expect = 2e-34
Identities = 282/407 (69%), Gaps = 18/407 (4%)
Strand=Plus/Minus
Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502
||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| |
Sbjct 1938 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 1879
Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559
||||||| |||| ||||||| ||| || ||| |||| ||||||| ||
Sbjct 1878 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 1822
Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619
| ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | |
Sbjct 1821 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 1762
Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679
| | |||||||||| |||||||| || ||||| ||| |||||||||| || |
Sbjct 1761 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 1702
Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739
| ||||| || |||||||||||| | | | || ||||||| || ||||||| ||
Sbjct 1701 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 1642
Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794
|||| | | ||||| | ||| | || | | |||| | || || |||||| |
Sbjct 1641 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 1585
Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840
|||| ||||||| ||||| | |||||||| |||| || |||
Sbjct 1584 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 1541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19302372856000
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