Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08]
129 sequences; 9,355,550 total letters
Query= NC_001330.1
Length=6087
Score E
Sequences producing significant alignments: (Bits) Value
seq69 603 4e-169
>seq69
Length=5386
Score = 603 bits (668), Expect = 4e-169
Identities = 1096/1599 (69%), Gaps = 71/1599 (4%)
Strand=Plus/Plus
Query 2810 AAAACATTATCAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCTCTTCGCGTACACCC 2869
|||||||||| |||||||||||||| |||||||| |||||||| | ||||||| |||
Sbjct 1 AAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT 60
Query 2870 TGCGTATTAAAGCAGGATTCAAAGAAACTGTAATGGATGCCGAGGAAAATGCTCGTCAGA 2929
||||| | |||||| || || | | | || || || ||||| | ||||| |
Sbjct 61 TGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAA 120
Query 2930 AATTACGCGCAAATGGACTGAAGTGATATG--AAG--AAAGCACGT-----CGTTCTCC- 2979
||||||| ||| | ||| ||| || || | ||| ||| |||| || || ||
Sbjct 121 AATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCC 180
Query 2980 TAGTCGTC------------------------------GTAAAGGTGCTCGCCTCTGGTA 3009
| |||||| ||||||| ||||| || |||||
Sbjct 181 TGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTA 240
Query 3010 TGTAGGCGGTTCTCAGTTTTAATTATGGGCCCTTCGGGGCCTT--TTAAGGA--AATTCA 3065
|||||| ||| || |||||||| || |||||| |||| || |||| ||||
Sbjct 241 TGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTTGAGGATAAATT-- 298
Query 3066 AATGTCTAATGTACAAACTTCCGCTGAACGTGAAATTGTTGACCTCTCTCATCTTGCCTT 3125
||||||||| | |||||| ||| || ||| |||||| || ||||||| |||
Sbjct 299 -ATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTT 357
Query 3126 --TGACTGTGGCATGCTTGGTCGTCTGAAGACTGTTTCATGGACTCCTGTTATCGCTGGC 3183
| ||| | || | |||||||||| | || ||||| ||||| ||||||||||||
Sbjct 358 CCTTGCTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGC 415
Query 3184 GATTCCTTTGAGCTTGATGCTGTTGGTGCTTTGCGTCTTTCCCCTCTGCGTCGTGGTTTA 3243
|| ||||| ||| | || || ||||| ||| | |||||||| || |||||||||| |
Sbjct 416 GACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTT 475
Query 3244 GCTATTGATTCTAAGGTTGATTTTTTCACCTTCTACATTCCGCATCGTCATGTTTATGGC 3303
|||||||| |||| || || |||| || || || | || |||||||| ||||||||
Sbjct 476 GCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGT 535
Query 3304 GACCAGTGGATTCAGTTTATGCGTGATGGTGTTAATGCTCAGCCTCTGCCTTCTGTTACT 3363
|| ||||||||| |||| ||| |||||||||||||| ||||| || ||||||
Sbjct 536 GAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAAC 595
Query 3364 TGCAATCGCTATCCGGACCATGCTGGTTATGTAGGTACTATTGTTCCTG---CAAATAAC 3420
| | | ||| |||||||| | || | | || || ||| |||| | |||||
Sbjct 596 ACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAA- 654
Query 3421 CGTATTCCTAAGTTTTTGCATCAGAGCTATCTGAACATTTACAATAACTATTTCCGTGCC 3480
|| |||||| |||| |||| | ||| |||| || || || |||||||| ||
Sbjct 655 --AATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCG 712
Query 3481 CCGTGGATGCCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATGAGGATGATGCTCGT 3540
|||||||||||||| ||||||||||| ||||| | | |||||| | ||||||||||||
Sbjct 713 CCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGT 772
Query 3541 TATCGCTTCCGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGCTGCCTCCGGAAACC 3600
||| | |||||||||||||| || ||||| |||||| |||||||||| ||||| || ||
Sbjct 773 TATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACT 832
Query 3601 AAATTGGCTGAAGAAATGGGTATTGAAAGCAATTCCATTGATATTATGGGTTTGCAAGCC 3660
| | || ||||| | | | || || ||||| ||||||||| |||||||
Sbjct 833 GAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCT 892
Query 3661 GCTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTACTTTATGCAGCGTTACCGTGAT 3720
|||||||| | | || ||||| || || ||| |||||| ||||||||||||| ||||
Sbjct 893 GCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGAT 952
Query 3721 GTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTT 3780
||||| || ||||| ||| |||||| ||||| || || ||||| || || |||||
Sbjct 953 GTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTC 1012
Query 3781 ATGCACACCGACTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTT 3840
|||| | | | ||||||| || || || || ||||| || || |||||| | || |
Sbjct 1013 ATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTA 1072
Query 3841 GGACAATTCTCTGGTCGAGTCCAGCAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTG 3900
|| || || |||||||| || || ||||| | |||||| || |||||||| ||||| ||
Sbjct 1073 GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTT 1132
Query 3901 CCTGAGCATGGTGTCATGATGACTTTGGCTCTGATTCGCTTCCCGCCTATCAGTCCGTTG 3960
||||||||||| ||| | ||| | || || |||| || ||||||| |
Sbjct 1133 CCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA 1192
Query 3961 GAGCACCATTATCTTGCTGGTAAGTCTCAGTTAACCTATACCGACCTTGCTGGCGACCCG 4020
||| || || ||| | ||| | || || |||||||| |||||||||||||
Sbjct 1193 GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCT 1252
Query 4021 GCTCTGATTGGTAACTTGCCTCCTCGCGAGATTAGTTATCGA-GATCTGTTCCGTGATGG 4079
| | || ||| |||||||| || || || ||| ||| | ||| | |||||| |||
Sbjct 1253 GTTTTGTATGGCAACTTGCCGCCGCGTGAAATT-TCTATGAAGGATGTTTTCCGTTCTGG 1311
Query 4080 TCGTTCTGGTATTAAGATTAAAGTTGCCGAGTCTATTTGGTATCGTACTCATCCTGATTA 4139
| ||| || ||| |||| |||| ||| | ||||||||| | ||| ||
Sbjct 1312 TGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTA 1371
Query 4140 CGTTAACTTTAAGTATCATGATTTGCATGGATTCCCGTTCCTTGATGATGCGCCTGGTAC 4199
||| | ||||| | | | || ||||| ||| || | || |||
Sbjct 1372 TGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC------- 1424
Query 4200 ATCTACTGGTGATAATCTTCAGGAAGCTATCCTTGTTCGTCATCAGGACTATGATGCTTG 4259
|| |||||| || | || ||| | ||| |||| || || || ||||| ||
Sbjct 1425 --CTTCTGGTG---ATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTG 1479
Query 4260 CTTCCAGTCTCAGCAGTTGCTACAGTGGAACAAACAGGCTCGCTATAACGTTAGTGTTTA 4319
|||||||| |||||| | |||||||| | |||| | | ||| || | |||||
Sbjct 1480 TTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTA 1539
Query 4320 TCGCCATATGCCTACTGTACGTGATTCCATTATGACCTC 4358
|||| || |||| || || ||||| || ||||| ||
Sbjct 1540 TCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTC 1578
Score = 284 bits (314), Expect = 5e-73
Identities = 211/247 (85%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 2560 CAGGCTAGTGCTGTTTTGGATGTTACTGAGGAAGATTTCGATTTTCTGACTGGTGATAAG 2619
|||||| ||| ||||||||| | || || || ||||||||||||||||| || | ||
Sbjct 5137 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 5196
Query 2620 ATTTGGATTGCTACCGACCGTAACCGTGCGCGTCGTTGTGTTGAGGCTTGTGTTTATGGA 2679
||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 5197 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 5256
Query 2680 ACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2739
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5257 ACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 5316
Query 2740 ATTGCTTATTATGTTCATCCCGTCAATGTACAAACAGCATGCCTCGTTATGGAAGGCGCG 2799
|||||||||||||||||||||||||| | ||||| || || ||| | |||||||||||
Sbjct 5317 ATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCT 5376
Query 2800 GAGTTTA 2806
|| ||||
Sbjct 5377 GAATTTA 5383
Score = 174 bits (192), Expect = 6e-40
Identities = 280/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1293 GGCTGGTTCTTCGTATTTGATACGTTAACCCTTGCTGATGACCGTTTGCAGGCTTTTAAT 1352
|| ||||| |||| ||||| || | || | ||||| ||||| || |||| ||| ||
Sbjct 3861 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 3920
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 3921 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 3980
Query 1413 GAAGGTCGTTCGGTCAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || || ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 3981 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 4040
Query 1473 TTTGGAGGTCAGC--ACGGCCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1530
| || | |||| | ||||||||||||| || | ||||| | ||||||| ||||
Sbjct 4041 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 4098
Query 1531 CTTTGGGAAGTCATGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || |||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 4099 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 4157
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTTCGCTATCAACAT 1649
| || | | |||||||||||| | || || || || |||||||| ||
Sbjct 4158 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 4217
Query 1650 GACGCTTATTCCCGCAAAGGTTGGCTGTGGCCTGTTGA 1687
||||||| ||| || |||||| |||||||||||||
Sbjct 4218 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 4255
Score = 82.4 bits (90), Expect = 3e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707
|||||||||| |||||||| || ||||| || || |||||||| || || ||||| |
Sbjct 2752 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 2811
Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762
| |||||||||||| ||| | || ||||| || ||||||||||||||
Sbjct 2812 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 2866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19363171899156
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