Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016195.1_202016-02-08]
129 sequences; 9,355,550 total letters
Query= NC_007821.1
Length=6068
Score E
Sequences producing significant alignments: (Bits) Value
seq69 637 2e-179
>seq69
Length=5386
Score = 637 bits (706), Expect = 2e-179
Identities = 1108/1599 (69%), Gaps = 74/1599 (5%)
Strand=Plus/Plus
Query 2833 AAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCTCTTCGCGTACACCT 2892
|||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct 1 AAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCT 60
Query 2893 TGCGTGTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAGAGAATGCTCGTCAG 2951
||||||| || ||| || || || |||| ||| ||||| || | |||||
Sbjct 61 TGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAGAAAACGTGCGTCAA 119
Query 2952 AAACTTCGTGCAAGTGGAGTAATGTAATATG--------AAGAAAGCTC-GTCGTTC-CC 3001
||| | |||||| ||||| ||||||| | || || | || | || || ||
Sbjct 120 AAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCC 179
Query 3002 CTTCTCGT---------------------------AAG---AAAGGCGCTCGTCTCTGGT 3031
|| |||| ||| |||||||||||||| ||||
Sbjct 180 CTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGT 239
Query 3032 ATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCTA---TAAGGATTCTTAA 3088
||||||| ||| ||||||||||| ||||||||||||||| | ||||| | |
Sbjct 240 ATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTTGAGGATAAATTA 299
Query 3089 ATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTTCTCATCTGGTTTTT 3148
|||| || | |||||| ||| || ||||| || || |||||||| ||||| | ||
Sbjct 300 -TGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTC 358
Query 3149 GATGCAGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTGTTGTTGCAGGTGAT 3208
||| || | ||||||||| | | |||| ||||| ||| | || || ||
Sbjct 359 CTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGAC 418
Query 3209 TCTTTTGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTCGTCGTGGCCTTGCT 3268
|| || ||| | || |||||||| | || ||||| || | |||||||||||||||
Sbjct 419 TCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCT 478
Query 3269 GTTGACTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCATGTATATGGTGAG 3328
|||||||| ||| ||| | || || |||||||||||||||||||| || ||||||||
Sbjct 479 ATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAA 538
Query 3329 CAGTGGATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCCCCTGTTCAGTGC 3388
||||||||| | || |||||| | |||||| |||| ||||| | | ||||| | |
Sbjct 539 CAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAA---C 595
Query 3389 TCTCGCGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTCCGTCTAGTAACTTA 3442
|| |||| ||| || || | ||||| || ||| || || |
Sbjct 596 ACTACTGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT 652
Query 3443 AAGGTTCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATAATTACTTTAAAG 3500
|| | |||||| ||| || ||| ||||| |||| || || || || || |||||||
Sbjct 653 AAAATCCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAG 710
Query 3501 CTCCGTGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGGGTGAAGATGTTC 3560
| ||||||||| ||||| || | || ||||| | | | | || |||| ||
Sbjct 711 CGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTC 770
Query 3561 GTTTTGGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGCTTCCTCCGGATA 3620
||| |||| | ||| || | | |||| ||||||||||||||||||||||| || |
Sbjct 771 GTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGA 830
Query 3621 CTGAAACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTATGGGTTTGCAGG 3680
|||| |||| ||| |||| |||| || ||||||||||||||| |||| |
Sbjct 831 CTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAG 890
Query 3681 CCGCTTATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGACTCGTTATCGTG 3740
| ||||||||| | || |||||||| || || ||||||||||||||| ||||| | ||
Sbjct 891 CTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATG 950
Query 3741 ATATTGTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATCGTCCTTTGCTTG 3800
|| || || ||||||||||| || |||||||| || || || |||||||| ||||
Sbjct 951 ATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTG 1010
Query 3801 TTATGCATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCGACCAAAGCTCTC 3860
| |||| ||| | ||||||| || |||||||||||||| || || ||||||| ||
Sbjct 1011 TCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGT 1070
Query 3861 TCGGTCAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTACCGCGATTCTTCT 3920
| || ||||| || |||||||| || ||||| | ||| ||||| || ||||| |||||
Sbjct 1071 TAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTG 1130
Query 3921 GCCCTGAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGCCGACT--CATGA 3978
|||||||||||||||||||| || || || | || || || ||||| ||| | |
Sbjct 1131 TTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTA 1190
Query 3979 AATGGAGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGATTTGGCTTGTGA 4038
|| ||||| || ||| | | ||||| | |||||||||||| ||| | ||| | ||
Sbjct 1191 AA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGA 1248
Query 4039 CCCTGCTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTCAGTTCTTCCATT 4097
||||| |||| ||||| |||||||| || ||||| || |||| | | |||| ||
Sbjct 1249 CCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTT 1307
Query 4098 CTGGAAGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATCG-CATGCAGCCT 4156
|||| | | | ||||||||||| ||||| |||||||||||||| |||| ||||
Sbjct 1308 CTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCT 1366
Query 4157 GATCG--CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCTATAGCGCGATTC 4214
||| ||| | | ||| || |||||| || || || ||| | | |
Sbjct 1367 --TCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGC 1424
Query 4215 CGTCTGATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACGATGAGGTTTTCC 4274
| |||| |||| | | | ||||| || || || | || || || |||||
Sbjct 1425 CTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCC 1484
Query 4275 AGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCACCATTTATCGTA 4334
|||| | ||| | ||| ||||||| ||| ||| |||||| ||| ||||||| |
Sbjct 1485 AGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCA 1544
Query 4335 ATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373
|| |||||||||||||||| || || ||||| || ||||
Sbjct 1545 ATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 1583
Score = 338 bits (374), Expect = 2e-89
Identities = 226/252 (90%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640
|||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | |
Sbjct 5135 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 5194
Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700
|| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||
Sbjct 5195 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 5254
Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760
| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 5255 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 5314
Query 2761 TCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGGCG 2820
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 5315 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCG 5374
Query 2821 CTGAGTTTACGG 2832
|||| |||||||
Sbjct 5375 CTGAATTTACGG 5386
Score = 165 bits (182), Expect = 3e-37
Identities = 278/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352
|| |||||| |||| ||||| || | || | ||||| || || || |||| ||| ||
Sbjct 3861 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 3920
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 3921 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 3980
Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| |||
Sbjct 3981 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 4040
Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530
| ||| |||| | || |||||||||| |||| ||||| | ||||||| ||||
Sbjct 4041 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 4098
Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || ||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 4099 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 4157
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649
| || | | |||||||||||| | || || || || || ||||| ||
Sbjct 4158 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 4217
Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687
|| |||| ||| || ||||||||||||||||||||
Sbjct 4218 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 4255
Score = 156 bits (172), Expect = 2e-34
Identities = 282/407 (69%), Gaps = 18/407 (4%)
Strand=Plus/Plus
Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502
||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| |
Sbjct 2566 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 2625
Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559
||||||| |||| ||||||| ||| || ||| |||| ||||||| ||
Sbjct 2626 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 2682
Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619
| ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | |
Sbjct 2683 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 2742
Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679
| | |||||||||| |||||||| || ||||| ||| |||||||||| || |
Sbjct 2743 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 2802
Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739
| ||||| || |||||||||||| | | | || ||||||| || ||||||| ||
Sbjct 2803 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 2862
Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794
|||| | | ||||| | ||| | || | | |||| | || || |||||| |
Sbjct 2863 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 2919
Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840
|||| ||||||| ||||| | |||||||| |||| || |||
Sbjct 2920 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 2963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19302371987392
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