Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016435.1_202016-02-08]
135 sequences; 9,359,904 total letters
Query= NC_001330.1
Length=6087
Score E
Sequences producing significant alignments: (Bits) Value
seq57 883 0.0
>seq57
Length=5386
Score = 883 bits (978), Expect = 0.0
Identities = 1308/1849 (71%), Gaps = 71/1849 (4%)
Strand=Plus/Plus
Query 2560 CAGGCTAGTGCTGTTTTGGATGTTACTGAGGAAGATTTCGATTTTCTGACTGGTGATAAG 2619
|||||| ||| ||||||||| | || || || ||||||||||||||||| || | ||
Sbjct 234 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 293
Query 2620 ATTTGGATTGCTACCGACCGTAACCGTGCGCGTCGTTGTGTTGAGGCTTGTGTTTATGGA 2679
||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 294 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 353
Query 2680 ACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2739
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 354 ACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 413
Query 2740 ATTGCTTATTATGTTCATCCCGTCAATGTACAAACAGCATGCCTCGTTATGGAAGGCGCG 2799
|||||||||||||||||||||||||| | ||||| || || ||| | |||||||||||
Sbjct 414 ATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCT 473
Query 2800 GAGTTTAGCGAAAACATTATCAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCTCTTC 2859
|| |||| ||||||||||| |||||||||||||| |||||||| |||||||| | |||
Sbjct 474 GAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTC 533
Query 2860 GCGTACACCCTGCGTATTAAAGCAGGATTCAAAGAAACTGTAATGGATGCCGAGGAAAAT 2919
|||| ||| ||||| | |||||| || || | | | || || || |||||
Sbjct 534 GCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAAC 593
Query 2920 GCTCGTCAGAAATTACGCGCAAATGGACTGAAGTGATATG--AAG--AAAGCACGT---- 2971
| ||||| |||||||| ||| | ||| ||| || || | ||| ||| ||||
Sbjct 594 GTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTG 653
Query 2972 -CGTTCTCC-TAGTCGTC------------------------------GTAAAGGTGCTC 2999
|| || || | |||||| ||||||| ||||
Sbjct 654 GCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTC 713
Query 3000 GCCTCTGGTATGTAGGCGGTTCTCAGTTTTAATTATGGGCCCTTCGGGGCCTT--TTAAG 3057
| || ||||||||||| ||| || |||||||| || |||||| |||| || ||
Sbjct 714 GTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTTGAG 773
Query 3058 GA--AATTCAAATGTCTAATGTACAAACTTCCGCTGAACGTGAAATTGTTGACCTCTCTC 3115
|| |||| ||||||||| | |||||| ||| || ||| |||||| || |
Sbjct 774 GATAAATT---ATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCC 830
Query 3116 ATCTTGCCTT--TGACTGTGGCATGCTTGGTCGTCTGAAGACTGTTTCATGGACTCCTGT 3173
|||||| ||| | ||| | || | |||||||||| | || ||||| ||||| ||
Sbjct 831 ATCTTGGCTTCCTTGCTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTCCGGT 888
Query 3174 TATCGCTGGCGATTCCTTTGAGCTTGATGCTGTTGGTGCTTTGCGTCTTTCCCCTCTGCG 3233
|||||||||||| ||||| ||| | || || ||||| ||| | |||||||| || ||||
Sbjct 889 TATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCG 948
Query 3234 TCGTGGTTTAGCTATTGATTCTAAGGTTGATTTTTTCACCTTCTACATTCCGCATCGTCA 3293
|||||| | |||||||| |||| || || |||| || || || | || ||||||||
Sbjct 949 TCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCA 1008
Query 3294 TGTTTATGGCGACCAGTGGATTCAGTTTATGCGTGATGGTGTTAATGCTCAGCCTCTGCC 3353
|||||||| || ||||||||| |||| ||| |||||||||||||| ||||| ||
Sbjct 1009 CGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC 1068
Query 3354 TTCTGTTACTTGCAATCGCTATCCGGACCATGCTGGTTATGTAGGTACTATTGTTCCTG- 3412
|||||| | | | ||| |||||||| | || | | || || ||| ||||
Sbjct 1069 GACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGA 1128
Query 3413 --CAAATAACCGTATTCCTAAGTTTTTGCATCAGAGCTATCTGAACATTTACAATAACTA 3470
| ||||| || |||||| |||| |||| | ||| |||| || || || |||||
Sbjct 1129 TACCAATAA---AATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTA 1185
Query 3471 TTTCCGTGCCCCGTGGATGCCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATGAGGA 3530
||| || |||||||||||||| ||||||||||| ||||| | | |||||| | ||
Sbjct 1186 TTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGA 1245
Query 3531 TGATGCTCGTTATCGCTTCCGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGCTGCC 3590
||||||||||||| | |||||||||||||| || ||||| |||||| |||||||||| ||
Sbjct 1246 TGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCC 1305
Query 3591 TCCGGAAACCAAATTGGCTGAAGAAATGGGTATTGAAAGCAATTCCATTGATATTATGGG 3650
||| || || | | || ||||| | | | || || ||||| ||||||||
Sbjct 1306 TCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGG 1365
Query 3651 TTTGCAAGCCGCTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTACTTTATGCAGCG 3710
| ||||||| |||||||| | | || ||||| || || ||| |||||| ||||||||
Sbjct 1366 TCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCG 1425
Query 3711 TTACCGTGATGTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACC 3770
||||| ||||||||| || ||||| ||| |||||| ||||| || || ||||| ||
Sbjct 1426 TTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCC 1485
Query 3771 GTTGCTTGTTATGCACACCGACTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCA 3830
|| ||||| |||| | | | ||||||| || || || || ||||| || || |||||
Sbjct 1486 TTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCA 1545
Query 3831 ATCTTCCCTTGGACAATTCTCTGGTCGAGTCCAGCAGACGTTTAAACACTCAGTGCCGCG 3890
| | || | || || || |||||||| || || ||||| | |||||| || ||||||||
Sbjct 1546 AACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCG 1605
Query 3891 ATTCTTCGTGCCTGAGCATGGTGTCATGATGACTTTGGCTCTGATTCGCTTCCCGCCTAT 3950
||||| || ||||||||||| ||| | ||| | || || |||| || |||||||
Sbjct 1606 TTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTAC 1665
Query 3951 CAGTCCGTTGGAGCACCATTATCTTGCTGGTAAGTCTCAGTTAACCTATACCGACCTTGC 4010
| ||| || || ||| | ||| | || || |||||||| ||||
Sbjct 1666 TGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGC 1725
Query 4011 TGGCGACCCGGCTCTGATTGGTAACTTGCCTCCTCGCGAGATTAGTTATCGA-GATCTGT 4069
||||||||| | | || ||| |||||||| || || || ||| ||| | ||| | |
Sbjct 1726 TGGCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGAAATT-TCTATGAAGGATGTTT 1784
Query 4070 TCCGTGATGGTCGTTCTGGTATTAAGATTAAAGTTGCCGAGTCTATTTGGTATCGTACTC 4129
||||| |||| ||| || ||| |||| |||| ||| | ||||||||| |
Sbjct 1785 TCCGTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATG 1844
Query 4130 ATCCTGATTACGTTAACTTTAAGTATCATGATTTGCATGGATTCCCGTTCCTTGATGATG 4189
||| || ||| | ||||| | | | || ||||| ||| || | ||
Sbjct 1845 CGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAAC 1904
Query 4190 CGCCTGGTACATCTACTGGTGATAATCTTCAGGAAGCTATCCTTGTTCGTCATCAGGACT 4249
||| || |||||| || | || ||| | ||| |||| || || || |
Sbjct 1905 CGC---------CTTCTGGTG---ATTTGCAAGAACGCGTACTTATTCGCCACCATGATT 1952
Query 4250 ATGATGCTTGCTTCCAGTCTCAGCAGTTGCTACAGTGGAACAAACAGGCTCGCTATAACG 4309
|||| || |||||||| |||||| | |||||||| | |||| | | ||| |
Sbjct 1953 ATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATG 2012
Query 4310 TTAGTGTTTATCGCCATATGCCTACTGTACGTGATTCCATTATGACCTC 4358
| | ||||||||| || |||| || || ||||| || ||||| ||
Sbjct 2013 TGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTC 2061
Score = 174 bits (192), Expect = 6e-40
Identities = 280/398 (70%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 1293 GGCTGGTTCTTCGTATTTGATACGTTAACCCTTGCTGATGACCGTTTGCAGGCTTTTAAT 1352
|| ||||| |||| ||||| || | || | ||||| ||||| || |||| ||| ||
Sbjct 4344 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 4403
Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412
|| || ||||||||| | ||||| ||||| | | ||||||| ||||| ||
Sbjct 4404 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 4463
Query 1413 GAAGGTCGTTCGGTCAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1472
|| ||||| || || ||||| || ||||||||||| ||| |||||||||| |||
Sbjct 4464 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 4523
Query 1473 TTTGGAGGTCAGC--ACGGCCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1530
| || | |||| | ||||||||||||| || | ||||| | ||||||| ||||
Sbjct 4524 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 4581
Query 1531 CTTTGGGAAGTCATGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590
|| || || |||||||||||| ||||| |||||| ||| |||||| |||| |
Sbjct 4582 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 4640
Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTTCGCTATCAACAT 1649
| || | | |||||||||||| | || || || || |||||||| ||
Sbjct 4641 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 4700
Query 1650 GACGCTTATTCCCGCAAAGGTTGGCTGTGGCCTGTTGA 1687
||||||| ||| || |||||| |||||||||||||
Sbjct 4701 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 4738
Score = 82.4 bits (90), Expect = 3e-12
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707
|||||||||| |||||||| || ||||| || || |||||||| || || ||||| |
Sbjct 3235 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 3294
Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762
| |||||||||||| ||| | || ||||| || ||||||||||||||
Sbjct 3295 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 3349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19363170592140
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