Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08]
165 sequences; 9,358,797 total letters
Query= NC_021862.1
Length=8576
Score E
Sequences producing significant alignments: (Bits) Value
seq57 120 2e-23
>seq57
Length=4629
Score = 120 bits (132), Expect = 2e-23
Identities = 269/390 (69%), Gaps = 13/390 (3%)
Strand=Plus/Minus
Query 6948 GCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 7007
||||| ||||||||||| || |||||||| || |||||||| || ||||||||||||||
Sbjct 4214 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 4155
Query 7008 TGCATCTCTGGGTCACGCTTGCCGCT-GCCATTCTTGGTCGAACTGGGCGCGGCAATCAG 7066
|||||||| || || || |||| ||| ||||||||||| ||||| || |||| |
Sbjct 4154 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAT 4096
Query 7067 CGAGGCGTCGACCACCGTGCACGTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGC 7124
| ||| ||||||| |||| | | | | || | ||| ||||| | | |||
Sbjct 4095 GGTGGCATCGACCAAGGTGC-CTTGAGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG- 4039
Query 7125 GTTGACGGTCTGCAGAAATTGCTCGGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCG 7184
|||| ||||| | ||||| ||| | || || ||||||||| ||| || ||
Sbjct 4038 ATTGATGGTCTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATT 3979
Query 7185 CAGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-A 7242
|| ||| || |||||||||| || ||| | | || || || | || |
Sbjct 3978 CATGATGGTGGTGCGGTCCGGCAAGGCGC-TATCCAGGGATAACCGGGCAAACAGACGCA 3920
Query 7243 TACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTG 7301
| | ||| | |||||||| || ||||||||||| | || |||| | |||| ||
Sbjct 3919 TGGA--GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATG 3862
Query 7302 CTGCAGAAAGTGGATGCGCAGCATCGTTTC 7331
||||| |||| ||||| ||||| |||||
Sbjct 3861 CTGCATGCAGTGAATGCGTAGCATGGTTTC 3832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27327949272400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |