Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016445.1_202016-02-08] 165 sequences; 9,358,797 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq57 120 2e-23 >seq57 Length=4629 Score = 120 bits (132), Expect = 2e-23 Identities = 269/390 (69%), Gaps = 13/390 (3%) Strand=Plus/Minus Query 6948 GCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 7007 ||||| ||||||||||| || |||||||| || |||||||| || |||||||||||||| Sbjct 4214 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 4155 Query 7008 TGCATCTCTGGGTCACGCTTGCCGCT-GCCATTCTTGGTCGAACTGGGCGCGGCAATCAG 7066 |||||||| || || || |||| ||| ||||||||||| ||||| || |||| | Sbjct 4154 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAT 4096 Query 7067 CGAGGCGTCGACCACCGTGCACGTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGC 7124 | ||| ||||||| |||| | | | | || | ||| ||||| | | ||| Sbjct 4095 GGTGGCATCGACCAAGGTGC-CTTGAGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG- 4039 Query 7125 GTTGACGGTCTGCAGAAATTGCTCGGCTAACTGGTGTCGCTCCAGCAAGTGCCGAAAGCG 7184 |||| ||||| | ||||| ||| | || || ||||||||| ||| || || Sbjct 4038 ATTGATGGTCTTGAACAATTGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATT 3979 Query 7185 CAGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-A 7242 || ||| || |||||||||| || ||| | | || || || | || | Sbjct 3978 CATGATGGTGGTGCGGTCCGGCAAGGCGC-TATCCAGGGATAACCGGGCAAACAGACGCA 3920 Query 7243 TACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTG 7301 | | ||| | |||||||| || ||||||||||| | || |||| | |||| || Sbjct 3919 TGGA--GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAATG 3862 Query 7302 CTGCAGAAAGTGGATGCGCAGCATCGTTTC 7331 ||||| |||| ||||| ||||| ||||| Sbjct 3861 CTGCATGCAGTGAATGCGTAGCATGGTTTC 3832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27327949272400