Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099165.1_202017-02- 08] 723 sequences; 11,377,591 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq114 453 4e-124 seq72 367 4e-98 seq108 302 2e-78 >seq114 Length=251 Score = 453 bits (502), Expect = 4e-124 Identities = 251/251 (100%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 3920 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGGAGGCTTTTT 3979 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGGAGGCTTTTT 60 Query 3980 TATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACTTTGAGCGTAT 4039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACTTTGAGCGTAT 120 Query 4040 CGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAAT 4099 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGAGGCTCTTAAACCTGCTATTGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAAT 180 Query 4100 GCTTGGCTTCCATAAGCAGATGGATAACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTT 4159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTTGGCTTCCATAAGCAGATGGATAACCGCATCAAGCTCTTGGAAGAGATTCTGTCTTT 240 Query 4160 TCGTATGCAGG 4170 ||||||||||| Sbjct 241 TCGTATGCAGG 251 >seq72 Length=203 Score = 367 bits (406), Expect = 4e-98 Identities = 203/203 (100%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 1848 CTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTACC 1907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 CTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTACC 144 Query 1908 TTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGCA 1967 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 TTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGCA 84 Query 1968 ACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGA 2027 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 ACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGA 24 Query 2028 AGTTTAAGATTGCTGAGGGTCAG 2050 ||||||||||||||||||||||| Sbjct 23 AGTTTAAGATTGCTGAGGGTCAG 1 >seq108 Length=168 Score = 302 bits (334), Expect = 2e-78 Identities = 167/167 (100%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 363 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167 TGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTC 108 Query 423 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107 CAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAA 48 Query 483 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGA 529 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47 GATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17123064592945