Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099165.1_202017-02- 08] 723 sequences; 11,377,591 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq108 80.6 1e-11 seq72 80.6 1e-11 >seq108 Length=168 Score = 80.6 bits (88), Expect = 1e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640 |||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | | Sbjct 79 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 20 Query 2641 AAATTTGGATTGCTACTGA 2659 || |||||||||||||||| Sbjct 19 AAGTTTGGATTGCTACTGA 1 >seq72 Length=203 Score = 80.6 bits (88), Expect = 1e-11 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 3936 CTATGTTCACACTCGCATTGGTCCGCTTCCCGCCGACTC--ATGAAATGGAGATGCATTA 3993 ||||||| || || || | || || || ||||| ||| | ||| ||||| || || Sbjct 203 CTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTA 146 Query 3994 CTTAGTTGGTAAAGAAGATTTGACTTATACTGATTTGGCTTGTGACCCTGCTTTG-ATGG 4052 | | | ||||| | |||||||||||| ||| | ||| | ||||||| |||| |||| Sbjct 145 CCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGG 86 Query 4053 CTAACTTGCCTCCTCGTGAGGTTAATATGTCTCAGTTCTTCCATTCTGGAAGTGCTAGTG 4112 | |||||||| || ||||| || |||| | | |||| |||||| | | | Sbjct 85 C-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTA 27 Query 4113 CTAAGTTTAAGATCGCTGAAGGTCAG 4138 ||||||||||| ||||| |||||| Sbjct 26 AGAAGTTTAAGATTGCTGAGGGTCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19302242999104