Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02- 08] 570 sequences; 11,326,697 total letters Query= NC_001330.1 Length=6087 Score E Sequences producing significant alignments: (Bits) Value seq155 140 1e-29 seq410 96.9 1e-16 >seq155 Length=727 Score = 140 bits (154), Expect = 1e-29 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 3733 TTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCACACCGAC 3792 ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | | | Sbjct 724 TTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAAT 665 Query 3793 TTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAATTCTCT 3852 ||||||| || || || || ||||| || || |||||| | || | || || || ||| Sbjct 664 CTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCT 605 Query 3853 GGTCGAGTCCAGCAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCATGGT 3912 ||||| || || ||||| | |||||| || |||||||| ||||| || ||||||||||| Sbjct 604 GGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGC 545 Query 3913 GTCATGATGACTTTGGCTCTGATTCGCTTCCCGCCTA 3949 ||| | ||| | || || |||| || ||||||| Sbjct 544 ACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTA 508 >seq410 Length=273 Score = 96.9 bits (106), Expect = 1e-16 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2560 CAGGCTAGTGCTGTTTTGGATGTTACTGAGGAAGATTTCGATTTTCTGACTGGTGATAAG 2619 |||||| ||| ||||||||| | || || || ||||||||||||||||| || | || Sbjct 166 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 225 Query 2620 ATTTGGATTGCTACCGACCGTAACCGTGCGCGTCGTTGTGTTGAGGCT 2667 ||||||||||||| ||||| ||||| ||||| || ||||||||| Sbjct 226 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19363075833480