Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02- 08] 570 sequences; 11,326,697 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq410 493 4e-136 seq155 428 2e-116 seq98 246 1e-61 >seq410 Length=273 Score = 493 bits (546), Expect = 4e-136 Identities = 273/273 (100%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 288 GTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACT 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACT 60 Query 348 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAA 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAA 120 Query 408 CAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTT 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTT 180 Query 468 TTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACT 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACT 240 Query 528 GACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT 560 ||||||||||||||||||||||||||||||||| Sbjct 241 GACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT 273 >seq155 Length=727 Score = 428 bits (474), Expect = 2e-116 Identities = 237/237 (100%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 1664 TCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCT 1723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 727 TCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCT 668 Query 1724 AATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTT 1783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 AATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTT 608 Query 1784 TCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCAT 1843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 TCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCAT 548 Query 1844 GGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATT 1900 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 547 GGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATT 491 Score = 250 bits (276), Expect = 9e-63 Identities = 138/138 (100%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 2162 CACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTT 2221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 138 CACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTT 79 Query 2222 AAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCG 2281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 AAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCG 19 Query 2282 TGATAAAAGATTGAGTGT 2299 |||||||||||||||||| Sbjct 18 TGATAAAAGATTGAGTGT 1 Score = 196 bits (216), Expect = 2e-46 Identities = 108/108 (100%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1955 GTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 2014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 GTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 327 Query 2015 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTAT 2062 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTAT 279 >seq98 Length=144 Score = 246 bits (272), Expect = 1e-61 Identities = 141/144 (98%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 2724 TCCTTTGAATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGTGACTATTGA 2783 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 144 TCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGTGACTATTGA 85 Query 2784 CGTCCTTCCCCGTACGCCGGGCAATAACGTTTATGTTGGTTTCATGGTTTGGTCTAACTT 2843 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 84 CGTCCTTCCTCGTACGCCGGGCAATAATGTTTATGTTGGTTTCATGGTTTGGTCTAACTT 25 Query 2844 TACCGCTACTAAATGCCGCGGATT 2867 |||||||||||||||||||||||| Sbjct 24 TACCGCTACTAAATGCCGCGGATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17123093247550