Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02- 08] 570 sequences; 11,326,697 total letters Query= NC_001730.1 Length=6089 Score E Sequences producing significant alignments: (Bits) Value seq155 143 1e-30 seq410 87.8 7e-14 >seq155 Length=727 Score = 143 bits (158), Expect = 1e-30 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 3729 TTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTATGCATACCGAT 3788 ||||| ||| |||||| ||||| || || ||||| || || ||||| |||| | || Sbjct 724 TTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAAT 665 Query 3789 TTTTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTGGACAGTTTTCG 3848 | ||||| || || || || ||||| || || |||||| | || | || |||||||| Sbjct 664 CTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCT 605 Query 3849 GGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGCCTGAGCATGGT 3908 || || ||||||||||| | |||||| || |||||||| ||||| || ||||||||||| Sbjct 604 GGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGC 545 Query 3909 GTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTA 3945 ||| | ||| | ||| ||||| || ||||||| Sbjct 544 ACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTA 508 >seq410 Length=273 Score = 87.8 bits (96), Expect = 7e-14 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2559 CAGGCTAGTTCTGTTCTGGATATCACCGAGGAAGATTTTGACTTCCTGACTGGTGATAAG 2618 |||||| | | ||| ||||| | ||||| || ||||| || || ||||| || | || Sbjct 166 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 225 Query 2619 ATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTAGAGGCT 2666 |||||||||||||||||||| ||||| |||||||| || |||||| Sbjct 226 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19369475792440