Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099255.1_202017-02- 08] 570 sequences; 11,326,697 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq155 134 5e-28 seq410 98.7 3e-17 >seq155 Length=727 Score = 134 bits (148), Expect = 5e-28 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 3212 TTCGGAGGTCACACCTCCTATGACGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAA 3271 || |||||| | ||||| ||||||| ||| ||||||||| | || | ||||||||| | Sbjct 724 TTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAAT 665 Query 3272 TTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCC 3331 | ||||| ||||||||||| || || || ||||||||| | || ||||| ||||| || Sbjct 664 CTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCT 605 Query 3332 GGTCGCGTCCAACAAACATTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACACGGC 3391 ||||| || ||||| || | || || || || || |||| ||| ||||| || ||| Sbjct 604 GGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGC 545 Query 3392 GTCATTATGACTCTCGCCGTTACTCGCTTCCCTCCTACT 3430 || | ||||| || || ||| || || |||||| Sbjct 544 ACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACT 506 >seq410 Length=273 Score = 98.7 bits (108), Expect = 3e-17 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 2004 ACTGCTCTCGCATCTATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGAC 2063 || ||| | || ||||| ||||||||||||||||| | || |||| | |||||||| Sbjct 139 ACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGAT 198 Query 2064 GACTTCGATTTCTTAACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGC 2123 || |||||||| | || || || || |||||||| ||||||||||| |||||||| Sbjct 199 GATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGT 258 Query 2124 CGCGCTATTGAGGC 2137 ||| ||||||| Sbjct 259 CGCTGCGTTGAGGC 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443091252550