Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq349 663 0.0 >seq349 Length=5528 Score = 663 bits (734), Expect = 0.0 Identities = 781/1054 (74%), Gaps = 2/1054 (0%) Strand=Plus/Plus Query 462 TAATCGAAGAATTGCAAGAATGCTATGACGTGCTCGGACAACTTGATATTAATAACACTA 521 |||| || |||||| | ||||||| | |||||| |||||||||||||||||||||| Sbjct 4476 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 4535 Query 522 TAGACCACAAACCCCTCGGTAATGACCATTGGAACCTCCTCTATGAAAAACCCGTATACA 581 |||||||| ||| || | || | ||| | | || || | || ||| Sbjct 4536 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGT-TACG 4594 Query 582 AACATTGGTATCA-GCTCGTTTCAAATCGACCCCTTAAAGATATCCGCGCCGATTACAAC 640 | || | || ||| | | | | || || ||||| ||||| |||| || || || Sbjct 4595 CAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT 4654 Query 641 TATGCAAAGGCTAAGGGTGTTAAAGATGAGTGCTCAAAAATCTTGGAGGAGTCAACTATG 700 || | || || ||| |||| |||||||| |||| | | |||||| || |||||| Sbjct 4655 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATG 4714 Query 701 AAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACTGCCCATTCT 760 || || || | |||||| | |||| | || |||||||| ||||| || ||| || Sbjct 4715 AAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCT 4774 Query 761 AAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTAAAGGATTTC 820 | || |||| | |||| || || ||||| || | || || ||||| ||| ||| || Sbjct 4775 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTT 4834 Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| || |||||||||||||||||||| ||| || Sbjct 4835 TATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCT 4894 Query 881 GCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCA 940 ||||| |||||| || |||| ||| |||||||||||||||||||||||||||| Sbjct 4895 GCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCT 4954 Query 941 GAGTATGGTACACAGCACGGTCGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTT 1000 |||||||||||| | || ||||| |||||||| || ||||| ||||||| |||||| Sbjct 4955 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTT 5014 Query 1001 CCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAAT 1060 ||| ||| | ||||||| || ||| | |||||||| || || ||||| Sbjct 5015 CCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAAT 5074 Query 1061 AGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAA 1120 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||| | || Sbjct 5075 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 5134 Query 1121 GACGCATTCTCTCGCGCTGGCTGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAA 1180 ||||| || || || |||| ||| | |||||||| || | || ||||| || |||||| Sbjct 5135 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAA 5194 Query 1181 GCTACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGAT 1240 |||||| ||||||||||| || ||||| || |||||||||||||||||||| |||||| Sbjct 5195 GCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGAT 5254 Query 1241 ATTGACATGGCCGTAAAAGGCCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAA 1300 || ||| | || | ||||| ||||| ||||||||||||||| ||||| |||||||| Sbjct 5255 ATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAG 5314 Query 1301 ATCAACCTCATACCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAA 1360 | || | |||||||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 5315 CTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAA 5374 Query 1361 CTGTTATCAATGGCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTAC 1420 || | ||||| | | ||||| |||| | | || |||| ||| | |||||||| Sbjct 5375 ATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTAC 5434 Query 1421 GACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGG 1480 |||| ||| ||||||||| | || |||||||||||||| || | |||| | | || |||| Sbjct 5435 GACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGG 5494 Query 1481 CTGGCAAAGAAATCTGTCGCCGACGTTTTGGAGG 1514 |||| ||| |||| ||||||||||||| || Sbjct 5495 CTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGG 5528 Score = 612 bits (678), Expect = 7e-172 Identities = 712/949 (75%), Gaps = 15/949 (2%) Strand=Plus/Plus Query 1494 CTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGCA 1553 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 13 CTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCG 72 Query 1554 ATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACGA 1613 || || || || || | |||||||| ||||||||||||||||| ||||| || Sbjct 73 CTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGA 132 Query 1614 AATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATTG 1673 | |||||| | |||||||||||||||| | ||||| || ||| | ||||||||| Sbjct 133 AGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTA 192 Query 1674 CTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCAA 1733 || |||| ||||||||||||||||||||||||||||| |||||||||| |||||| | Sbjct 193 CTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGA 252 Query 1734 TCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG- 1792 || ||| | |||||| ||||||||||| |||||||||||||| || |||| Sbjct 253 CCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACGA 311 Query 1793 TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTCC 1852 | ||| ||||||||||||| | || |||||||| | | |||||| | || | || Sbjct 312 TTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCG 371 Query 1853 TCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGACA 1912 ||||||||||||| | || || |||||| || ||||||| | | || | |||||| Sbjct 372 TCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACA 431 Query 1913 TACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAACCACAAA--GGAAA 1970 | | ||||| ||||| || |||| || ||| |||||| || || || Sbjct 432 TTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTC--AACCACTAATAGGTAA 489 Query 1971 CTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAACTGCTATCGCTTCT 2026 ||||| | | |||| || ||| | ||| || || || ||| | || ||| Sbjct 490 --GAAATCA-TGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCT 546 Query 2027 ATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGATTTTGACTTCTTA 2086 || || || ||||| || ||| | ||| | || || || || || ||||| || || | Sbjct 547 ATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTG 606 Query 2087 ACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG-TGCTATCGAGGC 2145 || | || || ||||||||||| ||||| || || ||||| || ||| | ||||| Sbjct 607 ACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGC-GTTGAGGC 665 Query 2146 TTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTGCTCCTGTTGAGTT 2205 |||||| ||||| || ||||||||||| || || |||||||||||||||||||||||||| Sbjct 666 TTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 725 Query 2206 TATTTCTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAACCGCCTGTCTCAT 2265 |||| ||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct 726 TATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCAT 785 Query 2266 CATGGAAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAACGCCCCGTTAAAGC 2325 ||||||||| ||||| ||||| |||||||| | ||||| || || || || |||||||| Sbjct 786 CATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGC 845 Query 2326 CTCTGAACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAGATCTTATCGGTCA 2385 | ||||| ||||||| || || | | ||| ||||| ||||||| || || | | | Sbjct 846 CGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA 905 Query 2386 CGCTGAAACAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGTAA 2434 ||| ||| |||| | ||| || | ||||| || |||| || |||||| Sbjct 906 CGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAA 954 Score = 423 bits (468), Expect = 7e-115 Identities = 804/1170 (69%), Gaps = 39/1170 (3%) Strand=Plus/Plus Query 2504 GGCAAATCTAAGGGTGCCCGTCTCTGGTATGTAGGCGGAACACAATACTAATCTTTTATG 2563 ||||| ||| || || ||||| ||||||||||| || ||||| |||| | | Sbjct 1072 GGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAAT--TGCA-- 1127 Query 2564 TGGGACCGCGGTCCCACTCTATTTAAGGATACAAAAATGTCTAACGTTCAAACATCTGCG 2623 ||| | ||| ||| || || |||||| || |||||||| ||||||| || Sbjct 1128 -GGGGCTTCGGCCCCT---TACTTGAGGATA-AATTATGTCTAATATTCAAACTGGCGCC 1182 Query 2624 GACCGTGTACCTCATGACTTATCTCACCTTGTCTTTGAGGCTGGTAAAATTGGCCGCCTC 2683 || ||| | || |||||| | || || |||| ||| |||||| | ||||| || || Sbjct 1183 GAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTT 1242 Query 2684 AAAACTATCTCTTGGACGCCTGGTGGTGCTGGTGACTCTTTCGAGTGTGATATGGTTGGC 2743 | || || || || || | | ||||| ||||| |||||| || |||||| Sbjct 1243 ATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGC 1302 Query 2744 GCTATTCGTCTGTCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCACGCGTTGATATCTTT 2803 ||| | ||||| || || | ||||||||||| ||| ||||||| || || || ||| Sbjct 1303 GCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTT 1362 Query 2804 CCTTTCTATATCCCACACCGTCATATCTACGGTCAGCAGTGGATTAACTTTATGAAGGAT 2863 |||| ||| |||| || ||||| | || ||| | ||||||||||| || ||||||||| Sbjct 1363 ACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGAT 1422 Query 2864 GGCGTTAATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGTTGG---GACTCTGCT 2920 || ||||||||| | ||||| || |||||| | | |||||| ||| ||| Sbjct 1423 GGTGTTAATGCCACTCCTCTCCCGACTGTTAA---CACTACTGGTTATATTGACCATGCC 1479 Query 2921 GCTTATCTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAATTCTTACATCAGGGC 2980 |||| ||| || || ||| || |||| |||| | ||||| || |||||| Sbjct 1480 GCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGT 1539 Query 2981 TATCTGAATATTTATAATAACTACTTCAAACCGCCTTGGTCTGATGACTTAACTTAC--- 3037 ||| ||||||| ||||| ||||| || ||| |||| ||| ||| || | | ||| Sbjct 1540 TATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGG----ATGCCTGACCGTACCGA 1595 Query 3038 -GCTAACCCATCCAATATGCCTTCTGAGGATTATAAATGG---GGCGTACGTGTCGCTAA 3093 |||||||| ||| || | | | ||| || | || | ||| | | Sbjct 1596 GGCTAACCCT---AATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCA 1652 Query 3094 CCTTAAATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTACATCTGAAAACATGAC 3153 || ||| || |||||||| || ||||| || || ||| ||| | ||||| Sbjct 1653 TCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGAC 1712 Query 3154 TACTGGTACATCCACTATTGACATTATGGGCCTTCAAGCCGCATACGCTAAATTACATAC 3213 ||| ||| | |||||||||||||||| || ||||| || || ||||| || ||||| Sbjct 1713 GACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATAC 1772 Query 3214 GGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATTATGAAAGAGTTCGGCGG 3273 || || |||||||||||||||||| ||||||| ||| |||| || || || Sbjct 1773 TGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGG 1832 Query 3274 TCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCGCTCTGAATTTTGGGC 3333 | | || || ||||| | |||||| |||||| | || ||||||||||| | | ||||| Sbjct 1833 TAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGC 1892 Query 3334 ATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCAATTCTCTGGTCGCGT 3393 |||||||||||| || || || ||||||||| | || | || || || |||||||| || Sbjct 1893 ATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGT 1952 Query 3394 TCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGAGCATCGCGTAATTAT 3453 ||| ||||||| || || || || || |||| ||||||||||||| || || | Sbjct 1953 TCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTT 2012 Query 3454 GACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAAATGCACTATCTTGTA 3511 ||||| ||| || ||| |||||||||||| | ||| || || || || ||| Sbjct 2013 TACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAAC 2070 Query 3512 GGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCACTG-ATGGCTAACCT 3570 | ||||| || |||||||||||||||||| | ||||||| || ||||| ||| | Sbjct 2071 GCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTT 2129 Query 3571 GCCACCTCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCTCACCCGATTCTGCTAAA 3628 ||| || |||||| | || | || || | |||| || | | || ||| || Sbjct 2130 GCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCG--TCTAAGAAG 2187 Query 3629 TTCAAAATCGCTGAGGGCCAATGGTATCGT 3658 || || || |||||||| || ||||||||| Sbjct 2188 TTTAAGATTGCTGAGGGTCAGTGGTATCGT 2217 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 3692 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 3751 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 3752 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 3811 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 3812 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 3871 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 3872 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 3924 Score = 93.3 bits (102), Expect = 1e-15 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 4870 AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACTATCTCGCCGCCGCATTCCCCGAG 4929 ||||||||| |||| || || ||||| || || ||||| || || ||||| || ||| Sbjct 3467 AAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAG 3526 Query 4930 CTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTAGTCCAGGCATGCAAGACGCTGGC 4989 || || | ||||| ||||||||||||| ||||| | | || ||| ||||| || Sbjct 3527 CTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGA 3586 Query 4990 TTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTGAC 5028 || | ||||| || ||||| || || ||||| || ||| Sbjct 3587 TTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGAC 3625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734201762660