Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02-
08] 1,022 sequences; 11,528,256 total letters
Query= NC_007817.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq349 713 0.0
>seq349
Length=5528
Score = 713 bits (790), Expect = 0.0
Identities = 736/959 (77%), Gaps = 23/959 (2%)
Strand=Plus/Plus
Query 1494 CTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGCA 1553
|||| ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||
Sbjct 13 CTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCG 72
Query 1554 ATTTGACCCGTCAAA----TCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATGACA 1609
|| || | ||| | || || |||||||||||||||||||||||||| |||||
Sbjct 73 CTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACG 128
Query 1610 ACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCAGGA 1669
||| |||||| | ||||||||||||||| | ||||| || |||||| ||||||
Sbjct 129 CAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGA 188
Query 1670 ATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAAAT 1729
|||||| || || ||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 189 ATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAAT 248
Query 1730 TCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACCTGA 1789
|| | || ||| | ||||||||||||||||| || |||||||||||||| || |
Sbjct 249 TCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-A 307
Query 1790 ACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGTGCT 1848
||| | ||| |||| |||||||| | || ||||| || | || |||||||| || |
Sbjct 308 ACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACG 367
Query 1849 CTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATGCTT 1908
|| ||||||||||||| | || || |||||| || ||||||| | | || | ||
Sbjct 368 TTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT 427
Query 1909 GACTTATTAAATGAACGTGGACTATTATCCACATCAA--------CAACCAACCCAAAAG 1960
||| | ||||| || |||||| || |||| || |||||| | || ||
Sbjct 428 GACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAATAG 485
Query 1961 GAAATACAAAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGCATC 2017
| || | | |||| | || ||| | || ||| || ||| | || ||
Sbjct 486 GTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTC 545
Query 2018 TATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTTCTT 2077
||| ||||||||||||||||| | || |||| | |||||||| || |||||||| |
Sbjct 546 TATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCT 605
Query 2078 AACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGGC 2137
|| || || || |||||||| ||||||||||| |||||||| ||| |||||||
Sbjct 606 GACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC 665
Query 2138 CTGCGTATATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 2197
||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 666 TTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 725
Query 2198 TATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCTTAT 2257
|||||||||||||||||||||||||||||||||||| ||||| || || || ||||| ||
Sbjct 726 TATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCAT 785
Query 2258 TATGGAAGGCGCCGAGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAAGGC 2317
||||||||||| || || || ||||| ||||| ||||| | || | || ||||| ||
Sbjct 786 CATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGC 845
Query 2318 CGCTGAACTATTCGCTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTACACA 2377
||||||| | ||||| |||||| ||||||||||||| |||||||||||| | |||| |
Sbjct 846 CGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA 905
Query 2378 TGCAGAAACTAACGTACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAAGG 2436
|||||| ||||| ||| || |||||||||| ||||||| |||||||| |||||||
Sbjct 906 CGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGG 964
Score = 634 bits (702), Expect = 2e-178
Identities = 660/864 (76%), Gaps = 4/864 (0%)
Strand=Plus/Plus
Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712
|| |||||||||||||| || || | | | || |||| ||||| |||||||| ||||||
Sbjct 4667 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 4726
Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772
|||||| | | || | | |||||||| ||||| || || |||| || ||||
Sbjct 4727 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 4786
Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832
| || || || ||||| || | || || ||||| | ||| || ||||||||||||
Sbjct 4787 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 4846
Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892
|||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 4847 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 4906
Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952
| |||||||| | ||||||||||||||||||||||||||||||||||| |
Sbjct 4907 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA-- 4964
Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010
|||| | |||||| | ||||| || || |||||| ||||||| ||||||||| |||
Sbjct 4965 CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 5024
Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070
| |||||||| ||||| | ||| || | | || || |||||||||||||||
Sbjct 5025 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 5084
Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130
|||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| ||||
Sbjct 5085 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 5144
Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190
| || |||| ||| | ||||| |||||| | || || || || |||||||||||| |
Sbjct 5145 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 5204
Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250
|||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | |
Sbjct 5205 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 5264
Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310
| ||||||||||||| ||||||||||||||| ||||| |||||||| | || |
Sbjct 5265 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 5324
Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370
| |||||||| | || | ||||| ||| ||||||||||| ||||| ||| |||||
Sbjct 5325 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 5384
Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430
||| | || || |||| |||||||||| ||| | |||| ||||||| ||| |
Sbjct 5385 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 5444
Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490
|||||||| | || |||||||||||||| || | |||| | |||||||||||| |||
Sbjct 5445 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 5504
Query 1491 AATCTGTCGCCGACGTTTTGGAGG 1514
|||| ||||||||||||| ||
Sbjct 5505 TTACTGTAGCCGACGTTTTGGCGG 5528
Score = 462 bits (512), Expect = 8e-127
Identities = 948/1381 (69%), Gaps = 41/1381 (3%)
Strand=Plus/Plus
Query 2464 TAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGCTTCGG 2523
|||||| ||||| || |||||||| || || |||||| |||| | |||||||||||
Sbjct 1080 TAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAAT--TGCAGGGGCTTCGG 1137
Query 2524 CCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATTCCTAA 2583
||||| || || |||||| | |||||||| |||||||| ||| || || || || |
Sbjct 1138 CCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCA 1196
Query 2584 CGACCTTTCTCACCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATCTCCTG 2643
|||||||| || || | |||| |||||| | || || ||| | | || || ||
Sbjct 1197 TGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAAC 1256
Query 2644 GACTCCAGTTGTCGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGCCTTTC 2703
||||| ||| ||||||||||||| || || | || || |||||| | || |||||
Sbjct 1257 TACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTC 1316
Query 2704 TCCACTCCGTCGCGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTATATTCC 2763
|||| | ||||| |||||||| | |||||| || || || || |||| ||| | ||
Sbjct 1317 TCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCC 1376
Query 2764 GCATCGTCATATCTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAATGCCAC 2823
|||||||| | |||||| || | | ||| | |||||||| | ||| |||||||||||
Sbjct 1377 TCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCAC 1436
Query 2824 TCCTCTCGCACCTGTTACTACTGCCTCTGGCTGGGATGCTTCTGCC---TATCTTGGCAC 2880
||||||| | |||||| ||| | ||| | || |||| | |||||||||
Sbjct 1437 TCCTCTCCCGACTGTTAACACTAC---TGGTTATATTGACCATGCCGCTTTTCTTGGCAC 1493
Query 2881 TATTCCATCCTCAAACCTC-AAGGTTCCTAAATTCTTACATCAAGGATACCTTAATATTT 2939
||| | ||| | ||| || | ||||| || ||| || || | ||||| |
Sbjct 1494 GATTA-ACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCT 1552
Query 2940 ACAACAACTACTTTAAGCCACCGTGGGATGC-TGACCTTACATACGCTAACCCATCTAAC 2998
| |||||||| ||||| | |||||| |||| ||||| ||| | |||||||| |||
Sbjct 1553 ATAACAACTATTTTAAAGCGCCGTGG-ATGCCTGACCGTACCGAGGCTAACCC---TAAT 1608
Query 2999 ATGCCTGAACAGGATTATAAATGG---GGCGTTCGTGTC-GCTAACTTAAAATCTATCTG 3054
|| | | || ||| || | || | ||| | || | || |||| | || ||
Sbjct 1609 GAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC-ATTTG 1667
Query 3055 GACCGCCCCCTTACCTCCTAACTCTAAAACATCAGAGACTATGACCACTGGCGCTACGTC 3114
||| || || | |||||| | || | || ||||| ||| | || ||
Sbjct 1668 GACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATC 1727
Query 3115 TATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAACGTGA 3174
|||||| |||||||| |||||||||||||||||||| ||||| || | |||||||||||
Sbjct 1728 TATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGA 1787
Query 3175 CTACTTCATGACTCGCTATCGCGATATTATGAAAGACTTCGGAGGTCACACCTCCTATGA 3234
||||||||| || || | ||| |||| || |||||| | ||||| |||||
Sbjct 1788 TTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGA 1847
Query 3235 CGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAATTTTGGGCCTCTGGCTATGACGT 3294
|| ||| ||||||||| | || | ||||||||| | | ||||| ||||||||||| ||
Sbjct 1848 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGT 1907
Query 3295 CGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGTCGCGTCCAACAAACATTCAA 3354
|| || ||||||||| | || ||||| ||||| || ||||| || ||||| || | ||
Sbjct 1908 TGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAA 1967
Query 3355 TCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTCATTATGACTCTCGCCGTTAC 3414
|| || || || |||| ||| ||||| || ||| || | ||||| || ||
Sbjct 1968 ACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGT 2027
Query 3415 TCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATCTTGTCGGTAAAGAATCTTTA 3472
||| || || |||||| | ||| ||||| || || ||| || ||||| ||||
Sbjct 2028 TCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTG 2085
Query 3473 ACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGCGAAGT 3531
|| |||||||| | || ||||||||| | | |||||| ||| |||| ||||| ||| |
Sbjct 2086 ACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAAT 2144
Query 3532 ATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT---AAGTTCAAAATTGCCGA 3588
|| | ||||| | |||| | || | || || || ||||| || ||||| ||
Sbjct 2145 TTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCTAAGAAGTTTAAGATTGCTGA 2201
Query 3589 GGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCATTCCCTTATAACGCACTTGA 3645
||| || |||||||| | || |||| | | || | | ||||| || |||||
Sbjct 2202 GGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCCT--GCTTATCACCTTCTTGA 2258
Query 3646 CGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTTAAAACAACGTGTCCTAGTTA 3704
||||| || ||| | || | | ||| ||| ||| || || |||| || || ||
Sbjct 2259 AGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTC 2317
Query 3705 ACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACTCGCACACTGGAATATGCAAA 3764
| || | || ||| | || ||||| | || | || ||||||| ||
Sbjct 2318 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGG 2377
Query 3765 CTAAATTTAATACTACCGTCTATAGACATATGCCTACGACTCGTGATTCAATCATGACGT 3824
|||||||||| ||||| ||| | || |||| || ||||| |||||||||||||| |
Sbjct 2378 TTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTT 2437
Query 3825 C 3825
|
Sbjct 2438 C 2438
Score = 167 bits (184), Expect = 8e-38
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072
|| || || ||||| || || || ||||| ||||| |||||||| | ||| | ||
Sbjct 3695 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 3754
Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132
|| || |||| | ||||||| |||||| | |||||||| | || |||| |||||
Sbjct 3755 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 3814
Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192
|| ||| || |||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct 3815 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 3874
Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242
|| |||||||||||||||||| | || || || ||| ||||||| ||||
Sbjct 3875 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 3924
Score = 123 bits (136), Expect = 9e-25
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 4789 CTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTGCATTCCCCGACCTCA 4848
|||| ||||||||||| ||||| || |||||||||||| ||||||| || || || |
Sbjct 3471 CTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTA 3530
Query 4849 ACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCC 4908
| | ||||| |||||||| |||| |||||| |||||||| ||||||||||| || ||
Sbjct 3531 ATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTG 3590
Query 4909 AAAACCAAAAAGA 4921
| || ||||||||
Sbjct 3591 AGAATCAAAAAGA 3603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17443005017730
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