Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq349 713 0.0 >seq349 Length=5528 Score = 713 bits (790), Expect = 0.0 Identities = 736/959 (77%), Gaps = 23/959 (2%) Strand=Plus/Plus Query 1494 CTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGCA 1553 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 13 CTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCG 72 Query 1554 ATTTGACCCGTCAAA----TCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATGACA 1609 || || | ||| | || || |||||||||||||||||||||||||| ||||| Sbjct 73 CTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACG 128 Query 1610 ACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCAGGA 1669 ||| |||||| | ||||||||||||||| | ||||| || |||||| |||||| Sbjct 129 CAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGA 188 Query 1670 ATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAAAT 1729 |||||| || || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 189 ATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAAT 248 Query 1730 TCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACCTGA 1789 || | || ||| | ||||||||||||||||| || |||||||||||||| || | Sbjct 249 TCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-A 307 Query 1790 ACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGTGCT 1848 ||| | ||| |||| |||||||| | || ||||| || | || |||||||| || | Sbjct 308 ACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACG 367 Query 1849 CTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATGCTT 1908 || ||||||||||||| | || || |||||| || ||||||| | | || | || Sbjct 368 TTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTT 427 Query 1909 GACTTATTAAATGAACGTGGACTATTATCCACATCAA--------CAACCAACCCAAAAG 1960 ||| | ||||| || |||||| || |||| || |||||| | || || Sbjct 428 GACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAATAG 485 Query 1961 GAAATACAAAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGCATC 2017 | || | | |||| | || ||| | || ||| || ||| | || || Sbjct 486 GTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTC 545 Query 2018 TATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTTCTT 2077 ||| ||||||||||||||||| | || |||| | |||||||| || |||||||| | Sbjct 546 TATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCT 605 Query 2078 AACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGGC 2137 || || || || |||||||| ||||||||||| |||||||| ||| ||||||| Sbjct 606 GACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGC 665 Query 2138 CTGCGTATATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 2197 ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 666 TTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 725 Query 2198 TATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCTTAT 2257 |||||||||||||||||||||||||||||||||||| ||||| || || || ||||| || Sbjct 726 TATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCAT 785 Query 2258 TATGGAAGGCGCCGAGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAAGGC 2317 ||||||||||| || || || ||||| ||||| ||||| | || | || ||||| || Sbjct 786 CATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGC 845 Query 2318 CGCTGAACTATTCGCTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTACACA 2377 ||||||| | ||||| |||||| ||||||||||||| |||||||||||| | |||| | Sbjct 846 CGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGA 905 Query 2378 TGCAGAAACTAACGTACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAAGG 2436 |||||| ||||| ||| || |||||||||| ||||||| |||||||| ||||||| Sbjct 906 CGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGG 964 Score = 634 bits (702), Expect = 2e-178 Identities = 660/864 (76%), Gaps = 4/864 (0%) Strand=Plus/Plus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 4667 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 4726 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 4727 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 4786 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 4787 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 4846 Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892 |||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 4847 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 4906 Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952 | |||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct 4907 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA-- 4964 Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010 |||| | |||||| | ||||| || || |||||| ||||||| ||||||||| ||| Sbjct 4965 CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 5024 Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070 | |||||||| ||||| | ||| || | | || || ||||||||||||||| Sbjct 5025 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 5084 Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130 |||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| |||| Sbjct 5085 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 5144 Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190 | || |||| ||| | ||||| |||||| | || || || || |||||||||||| | Sbjct 5145 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 5204 Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250 |||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | | Sbjct 5205 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 5264 Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310 | ||||||||||||| ||||||||||||||| ||||| |||||||| | || | Sbjct 5265 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 5324 Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370 | |||||||| | || | ||||| ||| ||||||||||| ||||| ||| ||||| Sbjct 5325 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 5384 Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430 ||| | || || |||| |||||||||| ||| | |||| ||||||| ||| | Sbjct 5385 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 5444 Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490 |||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 5445 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 5504 Query 1491 AATCTGTCGCCGACGTTTTGGAGG 1514 |||| ||||||||||||| || Sbjct 5505 TTACTGTAGCCGACGTTTTGGCGG 5528 Score = 462 bits (512), Expect = 8e-127 Identities = 948/1381 (69%), Gaps = 41/1381 (3%) Strand=Plus/Plus Query 2464 TAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGCTTCGG 2523 |||||| ||||| || |||||||| || || |||||| |||| | ||||||||||| Sbjct 1080 TAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAAT--TGCAGGGGCTTCGG 1137 Query 2524 CCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATTCCTAA 2583 ||||| || || |||||| | |||||||| |||||||| ||| || || || || | Sbjct 1138 CCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCA 1196 Query 2584 CGACCTTTCTCACCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATCTCCTG 2643 |||||||| || || | |||| |||||| | || || ||| | | || || || Sbjct 1197 TGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAAC 1256 Query 2644 GACTCCAGTTGTCGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGCCTTTC 2703 ||||| ||| ||||||||||||| || || | || || |||||| | || ||||| Sbjct 1257 TACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTC 1316 Query 2704 TCCACTCCGTCGCGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTATATTCC 2763 |||| | ||||| |||||||| | |||||| || || || || |||| ||| | || Sbjct 1317 TCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCC 1376 Query 2764 GCATCGTCATATCTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAATGCCAC 2823 |||||||| | |||||| || | | ||| | |||||||| | ||| ||||||||||| Sbjct 1377 TCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCAC 1436 Query 2824 TCCTCTCGCACCTGTTACTACTGCCTCTGGCTGGGATGCTTCTGCC---TATCTTGGCAC 2880 ||||||| | |||||| ||| | ||| | || |||| | ||||||||| Sbjct 1437 TCCTCTCCCGACTGTTAACACTAC---TGGTTATATTGACCATGCCGCTTTTCTTGGCAC 1493 Query 2881 TATTCCATCCTCAAACCTC-AAGGTTCCTAAATTCTTACATCAAGGATACCTTAATATTT 2939 ||| | ||| | ||| || | ||||| || ||| || || | ||||| | Sbjct 1494 GATTA-ACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCT 1552 Query 2940 ACAACAACTACTTTAAGCCACCGTGGGATGC-TGACCTTACATACGCTAACCCATCTAAC 2998 | |||||||| ||||| | |||||| |||| ||||| ||| | |||||||| ||| Sbjct 1553 ATAACAACTATTTTAAAGCGCCGTGG-ATGCCTGACCGTACCGAGGCTAACCC---TAAT 1608 Query 2999 ATGCCTGAACAGGATTATAAATGG---GGCGTTCGTGTC-GCTAACTTAAAATCTATCTG 3054 || | | || ||| || | || | ||| | || | || |||| | || || Sbjct 1609 GAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC-ATTTG 1667 Query 3055 GACCGCCCCCTTACCTCCTAACTCTAAAACATCAGAGACTATGACCACTGGCGCTACGTC 3114 ||| || || | |||||| | || | || ||||| ||| | || || Sbjct 1668 GACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATC 1727 Query 3115 TATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAACGTGA 3174 |||||| |||||||| |||||||||||||||||||| ||||| || | ||||||||||| Sbjct 1728 TATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGA 1787 Query 3175 CTACTTCATGACTCGCTATCGCGATATTATGAAAGACTTCGGAGGTCACACCTCCTATGA 3234 ||||||||| || || | ||| |||| || |||||| | ||||| ||||| Sbjct 1788 TTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGA 1847 Query 3235 CGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAATTTTGGGCCTCTGGCTATGACGT 3294 || ||| ||||||||| | || | ||||||||| | | ||||| ||||||||||| || Sbjct 1848 CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGT 1907 Query 3295 CGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGTCGCGTCCAACAAACATTCAA 3354 || || ||||||||| | || ||||| ||||| || ||||| || ||||| || | || Sbjct 1908 TGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAA 1967 Query 3355 TCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTCATTATGACTCTCGCCGTTAC 3414 || || || || |||| ||| ||||| || ||| || | ||||| || || Sbjct 1968 ACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGT 2027 Query 3415 TCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATCTTGTCGGTAAAGAATCTTTA 3472 ||| || || |||||| | ||| ||||| || || ||| || ||||| |||| Sbjct 2028 TCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTG 2085 Query 3473 ACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGCGAAGT 3531 || |||||||| | || ||||||||| | | |||||| ||| |||| ||||| ||| | Sbjct 2086 ACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAAT 2144 Query 3532 ATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT---AAGTTCAAAATTGCCGA 3588 || | ||||| | |||| | || | || || || ||||| || ||||| || Sbjct 2145 TTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCTAAGAAGTTTAAGATTGCTGA 2201 Query 3589 GGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCATTCCCTTATAACGCACTTGA 3645 ||| || |||||||| | || |||| | | || | | ||||| || ||||| Sbjct 2202 GGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCCT--GCTTATCACCTTCTTGA 2258 Query 3646 CGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTTAAAACAACGTGTCCTAGTTA 3704 ||||| || ||| | || | | ||| ||| ||| || || |||| || || || Sbjct 2259 AGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTC 2317 Query 3705 ACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACTCGCACACTGGAATATGCAAA 3764 | || | || ||| | || ||||| | || | || ||||||| || Sbjct 2318 GCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGG 2377 Query 3765 CTAAATTTAATACTACCGTCTATAGACATATGCCTACGACTCGTGATTCAATCATGACGT 3824 |||||||||| ||||| ||| | || |||| || ||||| |||||||||||||| | Sbjct 2378 TTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTT 2437 Query 3825 C 3825 | Sbjct 2438 C 2438 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 3695 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 3754 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 3755 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 3814 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 3815 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 3874 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 3875 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 3924 Score = 123 bits (136), Expect = 9e-25 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 4789 CTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTGCATTCCCCGACCTCA 4848 |||| ||||||||||| ||||| || |||||||||||| ||||||| || || || | Sbjct 3471 CTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTA 3530 Query 4849 ACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCC 4908 | | ||||| |||||||| |||| |||||| |||||||| ||||||||||| || || Sbjct 3531 ATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTG 3590 Query 4909 AAAACCAAAAAGA 4921 | || |||||||| Sbjct 3591 AGAATCAAAAAGA 3603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17443005017730