Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq755 363 5e-97 seq144 340 6e-90 seq287 324 5e-85 >seq755 Length=201 Score = 363 bits (402), Expect = 5e-97 Identities = 201/201 (100%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 3949 TTTTCATGCCTCCAAATCTTGGAGGCTTTTTTATGGTTCGTTCTTATTACCCTTCTGAAT 4008 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTCATGCCTCCAAATCTTGGAGGCTTTTTTATGGTTCGTTCTTATTACCCTTCTGAAT 60 Query 4009 GTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATTGAGGCTT 4068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATTGAGGCTT 120 Query 4069 GTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACC 4128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACC 180 Query 4129 GCATCAAGCTCTTGGAAGAGA 4149 ||||||||||||||||||||| Sbjct 181 GCATCAAGCTCTTGGAAGAGA 201 >seq144 Length=188 Score = 340 bits (376), Expect = 6e-90 Identities = 188/188 (100%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 331 AAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCA 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 AAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCA 129 Query 391 TGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCA 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128 TGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCA 69 Query 451 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 68 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 9 Query 511 AAGTTTGG 518 |||||||| Sbjct 8 AAGTTTGG 1 >seq287 Length=179 Score = 324 bits (358), Expect = 5e-85 Identities = 179/179 (100%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1759 TGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGT 1818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 TGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGT 120 Query 1819 GCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC 1878 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 GCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCC 60 Query 1879 GCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCG 1937 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 GCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17122990802655