Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178315.1_202017-04- 21] 2,667 sequences; 12,341,154 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq907 167 8e-38 >seq907 Length=288 Score = 167 bits (184), Expect = 8e-38 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1494 CTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGCA 1553 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 13 CTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCG 72 Query 1554 ATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACGA 1613 || || || || || | |||||||| ||||||||||||||||| ||||| || Sbjct 73 CTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGA 132 Query 1614 AATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATTG 1673 | |||||| | |||||||||||||||| | ||||| || ||| | ||||||||| Sbjct 133 AGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTA 192 Query 1674 CTGTTGCTAACTTACGAATT 1693 || |||| ||||||||| Sbjct 193 CTACTGCTTGTTTACGAATT 212 Score = 87.8 bits (96), Expect = 6e-14 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1664 GCAGGAATTGCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGA 1723 ||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 275 GCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGA 216 Query 1724 GGAAATTC 1731 | |||||| Sbjct 215 GAAAATTC 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17733882682010