Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178315.1_202017-04- 21] 2,667 sequences; 12,341,154 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq907 178 5e-41 >seq907 Length=288 Score = 178 bits (196), Expect = 5e-41 Identities = 162/204 (79%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 1494 CTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGCA 1553 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 13 CTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCG 72 Query 1554 ATTTGACCCGTCAAA----TCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATGACA 1609 || || | ||| | || || |||||||||||||||||||||||||| ||||| Sbjct 73 CTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACG 128 Query 1610 ACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCAGGA 1669 ||| |||||| | ||||||||||||||| | ||||| || |||||| |||||| Sbjct 129 CAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGA 188 Query 1670 ATTACTGCTACTCACTTACGAATT 1693 |||||| || || ||||||||| Sbjct 189 ATTACTACTGCTTGTTTACGAATT 212 Score = 93.3 bits (102), Expect = 1e-15 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 1656 TTGATACTGCAGGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTG 1715 |||||| |||||||||||| || || ||||||||||||||||||||||||||||| | Sbjct 283 TTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCG 224 Query 1716 GAAAATGAAGAAATTC 1731 |||||||| |||||| Sbjct 223 GAAAATGAGAAAATTC 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17442691176405