Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value seq5246 156 2e-34 >seq5246 Length=461 Score = 156 bits (172), Expect = 2e-34 Identities = 127/151 (84%), Gaps = 5/151 (3%) Strand=Plus/Minus Query 6916 CAAAGTCAA-TTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGC 6974 |||||| || ||||| |||| | ||| |||||||| | |||||||||| | || || || Sbjct 213 CAAAGTTAAATTCAG-TGCCTTGAATGCGGATATACCGAGAACGCCGATATTAACGGTGC 155 Query 6975 TCGTAACATTTTAGCGGCGGGGCACGCCGTACTTGCCTGTGGAGGGACGATGCAGTCAGA 7034 |||||||||||||||||| ||||| |||| ||||||| |||||||| |||||||||| Sbjct 154 TCGTAACATTTTAGCGGCAGGGCATACCGTGCTTGCCTATGGAGGGATAGTGCAGTCAGA 95 Query 7035 CCGCCCGTTGAAGCAGGAACCAGACGCTGAG 7065 ||||||||||||||||||||| ||||||| Sbjct 94 CCGCCCGTTGAAGCAGGAACC---CGCTGAG 67 Score = 95.1 bits (104), Expect = 7e-16 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 6407 CGATAGTCGGTCTGGATGCTGGCGTGGCTAAACTCGCCACGCTGTCAGATGGCACAGTCT 6466 |||| || ||||||||||| || || | ||| | || | ||| || |||||||| || | Sbjct 340 CGATGGTTGGTCTGGATGCCGGAGTCACAAAATTAGCAATGCTTTCTGATGGCACGGTAT 281 Query 6467 TTGAACCTGTAAACAGTTTTCAGAAAAACCAGAAGAAGCTGGCGAGACTTCAGCGACAGT 6526 | || || ||||| ||| | ||||||| ||| |||| | |||||||| |||| Sbjct 280 ACCATCCAGTCAACAGCTTTAAAGCAAACCAGCGCAAGTTGGCAATGCTTCAGCGCCAGT 221 Query 6527 TAAGCCGCAAGGTCAAATTCAG 6548 |||||||||| || |||||||| Sbjct 220 TAAGCCGCAAAGTTAAATTCAG 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26934897114888