Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_001730.1 Length=6089 Score E Sequences producing significant alignments: (Bits) Value seq9 922 0.0 >seq9 Length=5443 Score = 922 bits (1022), Expect = 0.0 Identities = 1176/1613 (73%), Gaps = 56/1613 (3%) Strand=Plus/Minus Query 2559 CAGGCTAGTTCTGTTCTGGATATCACCGAGGAAGATTTTGACTTCCTGACTGGTGATAAG 2618 |||||| | | ||| ||||| | ||||| || ||||| || || ||||| || | || Sbjct 1689 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 1630 Query 2619 ATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTAGAGGCTTGTGTTTATGGA 2678 |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||| Sbjct 1629 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 1570 Query 2679 ACGCTGGACTTTGTCGGCTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2738 |||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct 1569 ACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 1510 Query 2739 ATTGCTTATTATGTTCATCCCGTCAACATTCAGACAGCATGCCTCGTTATGGAAGGCGCG 2798 |||||||||||||||||||||||||||||||| || || || ||| | ||||||||||| Sbjct 1509 ATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCT 1450 Query 2799 GAGTTTAGCGAAAACATTATTAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCTCTTC 2858 || |||| |||||||||||||||||||||||||| |||||||| |||||||| | ||| Sbjct 1449 GAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTC 1390 Query 2859 GCGTACACCCTGCGTATTAAGGCAGGATTCAAAGAAACTGTAATTGATGCCGAAGAGAAT 2918 |||| ||| ||||| | |||||| || || | | | ||| || ||||| || Sbjct 1389 GCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAAC 1330 Query 2919 GCTCGTCAGAAATTACGCGCAAATGGGTTGA---AATG---ATATGAAAAAAGCACGT-- 2970 | ||||| |||||||| ||| | || ||| |||| | | | ||||| |||| Sbjct 1329 GTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAA--ACGTTC 1272 Query 2971 ---CGTTCTCC-TAGTCGTC------------------------------GTAAAGGTGC 2996 || || || | |||||| ||||||| || Sbjct 1271 TGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGC 1212 Query 2997 TCGCCTCTGGTATGTAGGCGGTTCTCAGTTTTAATTAT-GGGCCTTCGGGCCC---CTTA 3052 ||| || ||||||||||| ||| || |||||||| ||| |||||| ||| ||| Sbjct 1211 TCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTTG 1152 Query 3053 AGGATTATTAATGTCTAATGTACAAACTTCAGCTGAACGTGAAATTGTTGACCTCTCTCA 3112 ||||| | | ||||||||| | |||||| || || ||| |||||| || || Sbjct 1151 AGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA 1092 Query 3113 TCTTG-CTT--TTGACTGTGGCATGATTGGTCGCTTGAAAACTGTTTCATGGACTCCTGT 3169 ||||| ||| ||| ||| | || ||||||||| | | || ||||| ||||| || Sbjct 1091 TCTTGGCTTCCTTG-CTG-GTCA-GATTGGTCGTCTTATTACCATTTCAACTACTCCGGT 1035 Query 3170 TATCGCTGGCGATTCCTTTGAGCTTGATGCTGTTGGTGCTTTGCGTCTTTCTCCTCTGCG 3229 |||||||||||| ||||| ||| | || || ||||| ||| | ||||||||||| |||| Sbjct 1034 TATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCG 975 Query 3230 TCGTGGTTTAGCCATTGATTCTAAGGTTGACTTTTTCACTTTCTATATTCCGCATCGTCA 3289 |||||| | || ||||| |||| || ||| |||| ||||| ||| | || |||||||| Sbjct 974 TCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCA 915 Query 3290 TGTTTATGGTGATCAGTGGATTCAATTTATGCGTGATGGTGTTGATGCTTCGCCGCTTCC 3349 ||||||||||| ||||||||| | || ||| ||||||||| |||| | || || || Sbjct 914 CGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCC 855 Query 3350 TTCCGTTACTACTACTAAGTATCCGGATGATGCTGGTTATGTTGGTACTATTGTTCCTAA 3409 | |||| |||||| ||| || |||| | || | |||| || ||| ||| | Sbjct 854 GACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGA 795 Query 3410 GAGCAACCGTATTCCTAAGTTTTTGCATCAGTCTTATCTGAATATTTATAATAACTATTT 3469 | ||| || |||||| |||| |||| |||| ||||||| ||||| |||||||| Sbjct 794 TACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTT 735 Query 3470 CCGTGCGCCGTGGATGCCTGAGCGTACTGAAGCTAATCCTTCAAA-CTTAGATCGTGATG 3528 ||||||||||||||||| ||||| || ||||| ||| | |||| ||| |||| Sbjct 734 TAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTA-ATCAAGATG 676 Query 3529 ATTCTCGTTATGGATTCCGTTGTTGCCATCTTAAAACTATTTGGTCTGCTCCTCTTCCTC 3588 || |||||||||| |||||||| |||||||| |||| |||||| ||||||| ||||||| Sbjct 675 ATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTC 616 Query 3589 CGGAAACTAAGCTCGCTGAGCAAATGGGCATTGAAAGCAATTCCATTGATATTATGGGTT 3648 | || ||| |||| || |||||| | | | || || ||||| ||||||||| Sbjct 615 CTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTC 556 Query 3649 TGCAGGCCGCTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTATTTTATGCAGCGTT 3708 |||| || |||||||| | | || ||||| || || ||| ||| || |||||||||| Sbjct 555 TGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTT 496 Query 3709 ACCGTGATGTTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGT 3768 ||| ||||||||| || ||||| ||| |||||| ||||| || || ||||| || | Sbjct 495 ACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTT 436 Query 3769 TGCTTGTTATGCATACCGATTTTTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAAT 3828 | ||||| |||| | || | ||||| || || || || ||||| || || |||||| Sbjct 435 TACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAA 376 Query 3829 CTTCCCTTGGACAGTTTTCGGGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCGCGAT 3888 | || | || |||||||| || || ||||||||||| | |||||| || |||||||| | Sbjct 375 CGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTT 316 Query 3889 TCTTCGTGCCTGAGCATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCA 3948 |||| || ||||||||||| ||| | ||| | ||| ||||| || ||||||| Sbjct 315 TCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTG 256 Query 3949 GTCCTTTGGAGCATCATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCTG 4008 || ||| ||| || ||| | | | ||||||||||||||| |||||| Sbjct 255 CGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTG 196 Query 4009 GTGACCCGGCTTTGATTGGTAATTTGCCGCCGCGTGAGATTTCTTATCAGGACCTTTTCC 4068 | ||||| | |||| ||| || |||||||||||||| |||||| |||| |||||| Sbjct 195 GCGACCCTGTTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCC 136 Query 4069 GTGATGGTCGCCCGGGCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGT 4121 || |||| || | ||| ||||| |||| ||| | ||||||||| Sbjct 135 GTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 83 Score = 158 bits (174), Expect = 5e-35 Identities = 280/400 (70%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 1292 GGCTGGTTCTTTGTGTTTGACACGTTGACCCTTGCCGATGACCGTTTGCAGGCATTCAAT 1351 || ||||| | || |||||||| | || | || || ||||| || |||| || || Sbjct 2965 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 2906 Query 1352 GAAAACCCCAATGCTCTTCGTGATTATTTTAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1411 || || ||||||||| | ||||| |||||| | | ||||||| ||||| || Sbjct 2905 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 2846 Query 1412 GAAGGTCGTTCGGTTAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1471 || ||||| || ||| ||||| || ||||||||||| ||| |||||||||| ||| Sbjct 2845 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 2786 Query 1472 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCACGTTGTGCATATGGTGCGGACTCTTC 1529 | || | |||| | || |||||||||| || | ||||| | ||||||| |||| Sbjct 2785 TATG--GTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 2728 Query 1530 CTTTGGGAAGTCATGACCCTAACTTCGGTCGCCCGGTACGTAATTATCGCCAGATTAACT 1589 || || || ||||||||| || ||||| | |||||| ||| |||||| |||| | Sbjct 2727 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 2669 Query 1590 CG-TTCCGTGGCATGTGGCCCTATGGCTTTAC-GCA-ACCGATAGCCGTTCGTTATCAAC 1646 | || | | |||||| ||||| |||| | | || || || ||||| || | Sbjct 2668 AGCTTGCAAAATACGTGGCCTTATGG--TTACAGTATGCCCATCGCAGTTCGCTACACGC 2611 Query 1647 ATGACGCTTATTCTCGCAAAGGTTGGTTATGGCCTGTTGA 1686 | ||||||| ||| || |||||||| ||||||||||| Sbjct 2610 AGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 2571 Score = 87.8 bits (96), Expect = 7e-14 Identities = 241/360 (67%), Gaps = 32/360 (9%) Strand=Plus/Minus Query 5252 TGATGCTGGTATTCAGTCTGCTATTCAGGGTTCTAATGTTCCTCCTGCTGGTCAATTGCC 5311 ||||||||||||| | ||||| ||||| || |||||||||||| ||| | | ||| Sbjct 4454 TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAG--GCC 4397 Query 5312 --CGCTTCTAATACTTCTGGTGTTATGGCTGATGCTGGTAATATGATTCGTAATGCTGGT 5369 | || | | |||||||| ||||||| | |||||||| | || | | || ||| Sbjct 4396 GTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAA-AGGACTTCT--TGAAGGT 4340 Query 5370 AGAGCTTTGCTTGATGGTACGATTCAGGCTGGCTCTGATAAGGTTAAAGAGGCTCTTATT 5429 | | |||| | ||| || ||| | | | ||||||||| | ||| || Sbjct 4339 A---CGTTGCAGGCTGGCAC--TTCTGCC-GTTTCTGATAAGTT-------GCTTGATTT 4293 Query 5430 GATAAGTTGG--TTGGAGGTAATGATGCTAAAGACCGAGGAAAGGCAACCCGTGATTACT 5487 | ||||| |||| || || ||| || |||||||| || |||||||| Sbjct 4292 G----GTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATC 4237 Query 5488 TGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCGTGCTGGAGCTGGTGCTTCCACTG 5547 | || || || || |||||||| || | |||||||||||||| |||| ||||||| ||| Sbjct 4236 TTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTG 4177 Query 5548 CCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAAAGAGATGCTTAAAATGCAACTGG 5604 | || | | || | | ||||| ||||||||| | |||||||||||||| Sbjct 4176 CTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAAAGAGCTTACTAAAATGCAACTGG 4120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19369577119660