Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001330.1 Length=6087 Score E Sequences producing significant alignments: (Bits) Value seq138322 163 1e-36 seq5071 156 2e-34 seq141255 122 3e-24 seq46248 105 3e-19 seq147810 98.7 4e-17 seq86902 96.9 1e-16 seq95953 89.7 2e-14 seq14021 87.8 7e-14 seq153508 84.2 8e-13 seq102286 84.2 8e-13 seq181149 82.4 3e-12 >seq138322 Length=159 Score = 163 bits (180), Expect = 1e-36 Identities = 122/143 (85%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 2732 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAATGTACAAACAGCATGCCTCGTTATGG 2791 |||||||||||||||||||||||||||||||||| | ||||| || || ||| | |||| Sbjct 1 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGG 60 Query 2792 AAGGCGCGGAGTTTAGCGAAAACATTATCAATGGCGTCGAGCGCCCGGTTAACGCCGCTG 2851 ||||||| || |||| ||||||||||| |||||||||||||| |||||||| ||||||| Sbjct 61 AAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTG 120 Query 2852 AGCTCTTCGCGTACACCCTGCGT 2874 | | ||||||| ||| ||||| Sbjct 121 AATTGTTCGCGTTTACCTTGCGT 143 >seq5071 Length=168 Score = 156 bits (172), Expect = 2e-34 Identities = 134/166 (81%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 3428 CTAAGTTTTTGCATCAGAGCTATCTGAACATTTACAATAACTATTTCCGTGCCCCGTGGA 3487 ||||| |||| |||| | ||| |||| || || || |||||||| || ||||||| Sbjct 168 CTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGA 109 Query 3488 TGCCTGAGCGTACCGAGGCCAACCCGTCTAATCTTAATGAGGATGATGCTCGTTATCGCT 3547 ||||||| ||||||||||| ||||| | | |||||| | ||||||||||||||| | | Sbjct 108 TGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTATGGTT 49 Query 3548 TCCGTTGCTGCCACCTTAAAAATATTTGGTCTGCTCCGCTGCCTCC 3593 ||||||||||||| || ||||| |||||| |||||||||| ||||| Sbjct 48 TCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCC 3 >seq141255 Length=862 Score = 122 bits (134), Expect = 3e-24 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2560 CAGGCTAGTGCTGTTTTGGATGTTACTGAGGAAGATTTCGATTTTCTGACTGGTGATAAG 2619 |||||| ||| ||||||||| | || || || ||||||||||||||||| || | || Sbjct 736 CAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAA 795 Query 2620 ATTTGGATTGCTACCGACCGTAACCGTGCGCGTCGTTGTGTTGAGGCTTGTGTTTATGGA 2679 ||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 796 GTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGT 855 Query 2680 ACGCTGG 2686 ||||||| Sbjct 856 ACGCTGG 862 >seq46248 Length=61 Score = 105 bits (116), Expect = 3e-19 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2701 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCC 2760 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTATGTTCATCCC 60 Query 2761 G 2761 | Sbjct 61 G 61 >seq147810 Length=61 Score = 98.7 bits (108), Expect = 4e-17 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2695 GGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2753 ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGCGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq86902 Length=53 Score = 96.9 bits (106), Expect = 1e-16 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 2701 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2753 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 53 >seq95953 Length=61 Score = 89.7 bits (98), Expect = 2e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2671 GTTTATGGAACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTAT 2729 |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 59 GTTTATGGTACGCTGGACTTTGTAGGATCCCCTCGCTTTCCTGCTCCTGTTGAGTTTAT 1 >seq14021 Length=61 Score = 87.8 bits (96), Expect = 7e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2667 TTGTGTTTATGGAACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTT 2726 ||| |||||||| |||||||||||||| || || |||||||||||||||||||||||||| Sbjct 61 TTGCGTTTATGGTACGCTGGACTTTGTAGGTTACCCTCGCTTTCCTGCTCCTGTTGAGTT 2 Query 2727 T 2727 | Sbjct 1 T 1 >seq153508 Length=54 Score = 84.2 bits (92), Expect = 8e-13 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 2686 GACTTTGTTGGATATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2739 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 54 GACTTTGTAGGATACCCTCGCTTTCCTGCTTCTGTTGAGTTTATTGCTGCCGTC 1 >seq102286 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2659 GTTGAGGCTTGTGTTTATGGAACGCTGGACTTTGTTGGATATCCTCGCTTTCCTGCTCC 2717 ||||||||||| |||||||| ||||||| |||||| ||||| ||||||||||||||||| Sbjct 3 GTTGAGGCTTGCGTTTATGGTACGCTGGCCTTTGTAGGATACCCTCGCTTTCCTGCTCC 61 >seq181149 Length=1558 Score = 82.4 bits (90), Expect = 3e-12 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 5648 AGATTGCTGGTATTCAGTCTGCCACTTCTCGTCAAAATACGAAGGATTCTGTTTATGCCC 5707 |||||||||| |||||||| || ||||| || || |||||||| || || ||||| | Sbjct 78 AGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCAC 137 Query 5708 AGAATGAGATGCTTCAGTATAATCAACGTGAGTCGCAGGCACGCGTTGCGTCTAT 5762 | |||||||||||| ||| | || ||||| || |||||||||||||| Sbjct 138 AAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTAT 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19323447326196