Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq141255 466 6e-128 seq138322 174 6e-40 seq181149 163 1e-36 seq46248 105 2e-19 seq72853 89.7 2e-14 seq86902 87.8 6e-14 seq147810 84.2 8e-13 seq95201 84.2 8e-13 seq14021 84.2 8e-13 seq166384 78.8 3e-11 seq105873 78.8 3e-11 seq95953 78.8 3e-11 >seq141255 Length=862 Score = 466 bits (516), Expect = 6e-128 Identities = 627/861 (73%), Gaps = 15/861 (2%) Strand=Plus/Plus Query 1313 CCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATG 1372 |||||||| |||||||||| ||||| ||||| ||||| |||||| || | ||||| Sbjct 9 CCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATG 68 Query 1373 GCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCG 1432 | | ||||| |||| | | || |||| ||| | |||||||||||| ||| ||| Sbjct 69 ACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCG 128 Query 1433 TTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAA 1492 |||||| | || |||||||||||||| || | |||| | | || |||||||| ||| Sbjct 129 TTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTT 188 Query 1493 TCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGC 1552 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 189 ACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGC 248 Query 1553 AATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACG 1612 || || || || || | |||||||| ||||||||||||||||| ||||| | Sbjct 249 GCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAG 308 Query 1613 AAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATT 1672 || |||||| | |||||||||||||||| | ||||| || ||| | ||||||||| Sbjct 309 AAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATT 368 Query 1673 GCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCA 1732 || |||| ||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 369 ACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCG 428 Query 1733 ATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG 1792 | || ||| | |||||| ||||||||||| |||||||||||||| || |||| Sbjct 429 ACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACG 487 Query 1793 -TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTC 1851 | ||| ||||||||||||| | || |||||||| | | |||||| | || | || Sbjct 488 ATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC 547 Query 1852 CTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGAC 1911 ||||||||||||| | || || |||||| || ||||||| | | || | ||||| Sbjct 548 GTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC 607 Query 1912 ATACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAACCAC--AAAGGAA 1969 || | ||||| ||||| || |||| || ||| |||||| | ||| | Sbjct 608 ATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAACCACTAATAGGTA 665 Query 1970 ACTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAACTGCTATCGCTTC 2025 | ||||| | | |||| || ||| | ||| || || || ||| | || || Sbjct 666 A--GAAAT-CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTC 722 Query 2026 TATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGATTTTGACTTCTT 2085 ||| || || ||||| || ||| | ||| | || || || || || ||||| || || | Sbjct 723 TATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCT 782 Query 2086 AACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG-TGCTATCGAGG 2144 || | || || ||||||||||| ||||| || || ||||| || ||| | |||| Sbjct 783 GACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGC-GTTGAGG 841 Query 2145 CTTGCGTATATGGAACACTGG 2165 ||||||| ||||| || |||| Sbjct 842 CTTGCGTTTATGGTACGCTGG 862 >seq138322 Length=159 Score = 174 bits (192), Expect = 6e-40 Identities = 134/159 (84%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 2211 CTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAACCGCCTGTCTCATCATGG 2270 ||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||| Sbjct 1 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGG 60 Query 2271 AAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAACGCCCCGTTAAAGCCTCTG 2330 |||| ||||| ||||| |||||||| | ||||| || || || || ||||||||| ||| Sbjct 61 AAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTG 120 Query 2331 AACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACA 2369 || ||||||| || || | | ||| ||||| ||||||| Sbjct 121 AATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACA 159 >seq181149 Length=1558 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 101 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 160 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 161 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 220 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 221 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 280 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 281 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 333 >seq46248 Length=61 Score = 105 bits (116), Expect = 2e-19 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2180 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGTTCATCCC 2239 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTATGTTCATCCC 60 Query 2240 G 2240 | Sbjct 61 G 61 >seq72853 Length=141 Score = 89.7 bits (98), Expect = 2e-14 Identities = 104/139 (75%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 4633 GGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTCCGACAACAAT 4692 |||||||| |||| ||| || || ||||| | || |||||| |||| |||||| Sbjct 140 GGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAAT 81 Query 4693 GTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTACTGTCCCTAAC 4752 |||||| ||||||||||||||||||||| ||||| ||||||| ||| |||||| Sbjct 80 ACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAAC 21 Query 4753 TCTCAGGAAGCTGCTCCCT 4771 || | || || | ||||| Sbjct 20 CCTGATGAGGCCG-TCCCT 3 >seq86902 Length=53 Score = 87.8 bits (96), Expect = 6e-14 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 2180 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGT 2232 |||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 53 >seq147810 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2174 GGGTATCCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGT 2232 || || |||||||||||||||||||||| ||||||| ||||||||||||||||||| || Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGCGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq95201 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 823 TGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACTGC 882 |||||||||||||||| | |||||||| || |||||||||||||||||||| ||| |||| Sbjct 61 TGATAATCCCAATGCTTTGCGTGACTATTTGCGTGATATTGGTCGTATGGTTCTTGCTGC 2 Query 883 C 883 | Sbjct 1 C 1 >seq14021 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2146 TTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTGCTCCTGTTGAGTT 2205 |||||| ||||| || ||||||||||| || || |||||||||||||||||||||||||| Sbjct 61 TTGCGTTTATGGTACGCTGGACTTTGTAGGTTACCCTCGCTTTCCTGCTCCTGTTGAGTT 2 Query 2206 T 2206 | Sbjct 1 T 1 >seq166384 Length=61 Score = 78.8 bits (86), Expect = 3e-11 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1190 TATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGATAT 1242 ||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct 8 TATATGGCTGTTGGTTTCTATGTTGCTAAATACGTTAACAAAAAGTCAGATAT 60 >seq105873 Length=61 Score = 78.8 bits (86), Expect = 3e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| | |||||||||||||||||||| ||| || Sbjct 61 TATGATAATCCCAATGCTTTGCGTGACTATGTTCGTGATATTGGTCGTATGGTTCTTGCT 2 Query 881 G 881 | Sbjct 1 G 1 >seq95953 Length=61 Score = 78.8 bits (86), Expect = 3e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2148 GCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTGCTCCTGTTGAGTTTA 2207 |||| ||||| || ||||||||||| || | |||||||||||||||||||||||||||| Sbjct 61 GCGTTTATGGTACGCTGGACTTTGTAGGATCCCCTCGCTTTCCTGCTCCTGTTGAGTTTA 2 Query 2208 T 2208 | Sbjct 1 T 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17699002608670