Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq138322 221 5e-54 seq141255 134 5e-28 seq181149 111 6e-21 seq46248 105 3e-19 seq147810 102 3e-18 seq86902 96.9 1e-16 seq95210 91.5 6e-15 seq153508 89.7 2e-14 seq95953 89.7 2e-14 seq14021 87.8 7e-14 seq102286 84.2 8e-13 seq177471 80.6 1e-11 >seq138322 Length=159 Score = 221 bits (244), Expect = 5e-54 Identities = 136/145 (94%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 2755 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGGCCTGCCTCATCATGG 2814 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGG 60 Query 2815 AAGGCGCTGAGTTTACGGAAAACATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTG 2874 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 61 AAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTG 120 Query 2875 AGCTCTTCGCGTACACCTTGCGTGT 2899 | | ||||||| ||||||||||| Sbjct 121 AATTGTTCGCGTTTACCTTGCGTGT 145 >seq141255 Length=862 Score = 134 bits (148), Expect = 5e-28 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640 |||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | | Sbjct 734 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 793 Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700 || |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| Sbjct 794 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 853 Query 2701 GAACACTGG 2709 | || |||| Sbjct 854 GTACGCTGG 862 >seq181149 Length=1558 Score = 111 bits (122), Expect = 6e-21 Identities = 191/273 (70%), Gaps = 12/273 (4%) Strand=Plus/Plus Query 5574 ATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATAATAATTTGCAGATT 5633 ||||| ||||| | |||||| || ||||| ||||||||| | | | | ||||| Sbjct 23 ATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGACTCAAAAAGAGATT 82 Query 5634 GCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAGTTTATGCTCAGAAT 5693 ||||| |||||||| || ||||| ||| |||||||||| || || ||||| || ||| Sbjct 83 GCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAAT 142 Query 5694 GAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGTCTATCCTCGCCAAC 5753 ||||||||| | | | || ||||||| || ||||||| |||||| | | ||| Sbjct 143 GAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAAC 202 Query 5754 ACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG---AATGGCCCTTACT 5807 || | ||| | || | | |||| | || || |||||| | |||| |||||| Sbjct 203 ACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCCAAATG---CTTACT 256 Query 5808 CGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840 | ||||| | |||||||| |||| || ||| Sbjct 257 CAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 289 >seq46248 Length=61 Score = 105 bits (116), Expect = 3e-19 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2724 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCC 2783 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTATGTTCATCCC 60 Query 2784 G 2784 | Sbjct 61 G 61 >seq147810 Length=61 Score = 102 bits (112), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2718 GGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2776 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGCGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq86902 Length=53 Score = 96.9 bits (106), Expect = 1e-16 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 2724 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2776 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 53 >seq95210 Length=190 Score = 91.5 bits (100), Expect = 6e-15 Identities = 97/126 (77%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 3013 AAAGGCGCTCGTCTCTGGTATGTAGGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCC 3072 |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||| Sbjct 64 AAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCC 123 Query 3073 CT---ATAAGGATTCTTAAATGTCAAACGTGCAAACTTCCGCTGAACGTATTCCTCACGA 3129 || | ||||| | ||||| || | |||||| ||| || ||||| || || || Sbjct 124 CTTACTTGAGGATAAAT-TATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGA 182 Query 3130 CCTTTC 3135 |||||| Sbjct 183 CCTTTC 188 >seq153508 Length=54 Score = 89.7 bits (98), Expect = 2e-14 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 2709 GACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTC 2762 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 54 GACTTTGTAGGATACCCTCGCTTTCCTGCTTCTGTTGAGTTTATTGCTGCCGTC 1 >seq95953 Length=61 Score = 89.7 bits (98), Expect = 2e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2694 GTTTATGGAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTAT 2752 |||||||| || ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 59 GTTTATGGTACGCTGGACTTTGTAGGATCCCCTCGCTTTCCTGCTCCTGTTGAGTTTAT 1 >seq14021 Length=61 Score = 87.8 bits (96), Expect = 7e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2690 TTGTGTTTATGGAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTT 2749 ||| |||||||| || ||||||||||| || ||||||||||||||||||||||||||||| Sbjct 61 TTGCGTTTATGGTACGCTGGACTTTGTAGGTTACCCTCGCTTTCCTGCTCCTGTTGAGTT 2 Query 2750 T 2750 | Sbjct 1 T 1 >seq102286 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2682 GTTGAGGCTTGTGTTTATGGAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCC 2740 ||||||||||| |||||||| || |||| |||||| ||||||||||||||||||||||| Sbjct 3 GTTGAGGCTTGCGTTTATGGTACGCTGGCCTTTGTAGGATACCCTCGCTTTCCTGCTCC 61 >seq177471 Length=402 Score = 80.6 bits (88), Expect = 1e-11 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4270 TTTCCAGTCTATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCACCATTTA 4329 ||||||||| | ||| | ||| ||||||| ||| ||| |||||| ||| |||| Sbjct 63 TTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTA 122 Query 4330 TCGTAATATGCCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373 ||| ||| |||||||||||||||| || || ||||| || |||| Sbjct 123 TCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGAT 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19262772148672