Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq141255 549 7e-153 seq138322 219 1e-53 seq181149 149 2e-32 seq95210 102 3e-18 seq46248 102 3e-18 seq147810 98.7 3e-17 seq86902 91.5 5e-15 seq102286 87.8 6e-14 seq95953 87.8 6e-14 seq14021 87.8 6e-14 seq153508 84.2 8e-13 seq17052 78.8 3e-11 >seq141255 Length=862 Score = 549 bits (608), Expect = 7e-153 Identities = 640/858 (75%), Gaps = 12/858 (1%) Strand=Plus/Plus Query 1319 CCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGGGATGAAACTACTCCCAATG 1378 || ||||| || || |||| |||||||||||||||||||||||||| | ||| ||||| Sbjct 9 CCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATG 68 Query 1379 ACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGTGGGTTACGACGTGACCCCG 1438 || | ||| || ||||||| ||||||||||| ||| | |||||||||||| ||| ||| Sbjct 69 ACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCG 128 Query 1439 TTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGCAA 1498 |||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 129 TTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTT 188 Query 1499 TCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGC 1558 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 189 ACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGC 248 Query 1559 AATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTTTATCGCTTCAATGACGCAG 1618 || || || || || | |||| ||| ||||||||||||||||| ||||||||| Sbjct 249 GCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAG 308 Query 1619 AAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTACGTTACTAATGCAGGAATT 1678 || ||| || | |||||||||||||||| | ||||| || || ||| ||||||||| Sbjct 309 AAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATT 368 Query 1679 GCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAACTTCA 1738 || |||| |||||| |||||||||||||||||||||| ||||||||| || ||| Sbjct 369 ACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCG 428 Query 1739 ATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACCTTTCGCCATCATCTCAACG 1798 | || ||| | |||||| |||||||| || |||||||||||||| || |||| Sbjct 429 ACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACG 487 Query 1799 -TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCTCAATATGATGGGCGCTCTT 1857 | | |||| ||||||||| | ||||| || || ||||| |||||| | ||| | | Sbjct 488 ATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC 547 Query 1858 CTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGGCAAAGAATCAATGCTTGAC 1917 | ||||||||||| | ||||| |||||| || ||||| | ||| || | ||||| Sbjct 548 GTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC 607 Query 1918 ATTCTAAATGAACGTGGCCTATTATCCACCTTGCCAAATG--GCTTAAC--TTACAAAGG 1973 ||| |||| || ||||| || ||| | | | ||| | | ||| || | | Sbjct 608 ATTTTAAAAGAGCGTGGATTACTAT---CTGAGTCCGATGCTGTTCAACCACTAATAGGT 664 Query 1974 AATCAAAAATGA---AAGCAAATGAGAACGCAGTAGCCTTTCAAACCGCTATTGCCTCCA 2030 || || |||| ||| | ||| | | ||| || || |||||| | ||||| | Sbjct 665 AAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTA 724 Query 2031 TCAAACTTATTCAGGCATCTTCTGTTCTTGACCTGACTGAGGACGATTTCGAATTCTTAA 2090 | || || |||||||| ||| | ||| | || | || || || |||||||| || | | Sbjct 725 TTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGA 784 Query 2091 CTCGTGACCGTGTATGGATTGCAACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGGCTT 2150 | || || || |||||||| ||||||||||| |||||||| ||| ||||||||| Sbjct 785 CGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTT 844 Query 2151 GCGTTTATGGAACTCTGG 2168 |||||||||| || |||| Sbjct 845 GCGTTTATGGTACGCTGG 862 >seq138322 Length=159 Score = 219 bits (242), Expect = 1e-53 Identities = 144/159 (91%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 2214 CTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATTCAAACGGCATGTCTTATTATGG 2273 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||| Sbjct 1 CTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGG 60 Query 2274 AAGGCGCTGAATTCACCGAAAACATCATTAATGGTGTCGATGCCCCGGTTAAAGCCGCTG 2333 ||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||| Sbjct 61 AAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTG 120 Query 2334 AACTCTTCGCGTTTACCTTGCGTGTACGCGCCGGAAACA 2372 || | |||||||||||||||||||||||||| ||||||| Sbjct 121 AATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACA 159 >seq181149 Length=1558 Score = 149 bits (164), Expect = 2e-32 Identities = 180/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 4992 ATCCAGTCTGTTACTTCTCGGCAAAATACTAAGGACTCTGTGTATGCTCAAAACGAAATG 5051 || ||||| | ||||| || || ||||| || ||| || ||||| ||||| || ||| Sbjct 89 ATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATG 148 Query 5052 CTCCAATACAACCAAAAAGAATCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGC 5111 || || | || || || |||| | ||||||| ||||| | |||||||| | Sbjct 149 CTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAAT 208 Query 5112 CTCACCAAACAACAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACC 5171 || |||| ||||| || ||| || |||||||| |||||||||||||| |||||||| Sbjct 209 CTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACG 268 Query 5172 TCAGGTCAACACTTTACAAATGACCAAATCCAAGAACTTACTCGAAAGGTCGGCGCTGAT 5231 | ||||| | ||||| |||||||||||| ||||| | ||||| ||||| | ||||| Sbjct 269 GCTGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAG 328 Query 5232 ATTGA 5236 |||| Sbjct 329 GTTGA 333 Score = 107 bits (118), Expect = 7e-20 Identities = 224/334 (67%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527 |||| || || || | |||||||||| |||||| |||||||||||||||||||||| Sbjct 1230 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 1289 Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587 |||||||| || || ||| |||||| ||| | | || || | || Sbjct 1290 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 1345 Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642 || | | | || | |||| | |||| || ||||| || | || || || Sbjct 1346 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 1404 Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702 || || | || || |||| ||| |||||||| || | | | || |||| ||||| Sbjct 1405 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 1464 Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762 |||||||| || | |||||| | ||||| | ||||||||||| ||||| || || Sbjct 1465 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 1524 Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTC 796 ||||||| |||| | | || || || |||||| Sbjct 1525 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTC 1558 >seq95210 Length=190 Score = 102 bits (112), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 2466 GGCAAATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTCTAAGG 2525 ||||| |||||| ||||| || |||||||| || || |||||| |||| | ||| Sbjct 55 GGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGC--AGG 112 Query 2526 GGCTTCGGCCCCTCTATTTAAGGATACAAAATGTCTAACGTACAAACTTCCGCTGAACGT 2585 ||||||||||||| || || |||||| | |||||||| | |||||| ||| || ||| Sbjct 113 GGCTTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGT 171 Query 2586 ATTCCGCATGACCTCTC 2602 || ||||||||||| || Sbjct 172 ATGCCGCATGACCTTTC 188 >seq46248 Length=61 Score = 102 bits (112), Expect = 3e-18 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2183 CCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCC 2242 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTATGTTCATCCC 60 Query 2243 G 2243 | Sbjct 61 G 61 >seq147810 Length=61 Score = 98.7 bits (108), Expect = 3e-17 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2177 GGATACCCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2235 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGCGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq86902 Length=53 Score = 91.5 bits (100), Expect = 5e-15 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 2183 CCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2235 |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 CCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 53 >seq102286 Length=61 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2142 TTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCC 2199 ||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||| Sbjct 4 TTGAGGCTTGCGTTTATGGTACGCTGGCCTTTGTAGGATACCCTCGCTTTCCTGCTCC 61 >seq95953 Length=61 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2151 GCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGTTTA 2210 |||||||||| || ||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct 61 GCGTTTATGGTACGCTGGACTTTGTAGGATCCCCTCGCTTTCCTGCTCCTGTTGAGTTTA 2 Query 2211 T 2211 | Sbjct 1 T 1 >seq14021 Length=61 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2149 TTGCGTTTATGGAACTCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGTT 2208 |||||||||||| || ||||||||||| || ||||||||||||||||||||| ||||||| Sbjct 61 TTGCGTTTATGGTACGCTGGACTTTGTAGGTTACCCTCGCTTTCCTGCTCCTGTTGAGTT 2 Query 2209 T 2209 | Sbjct 1 T 1 >seq153508 Length=54 Score = 84.2 bits (92), Expect = 8e-13 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 2168 GACTTTGTGGGATACCCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGCCGTC 2221 |||||||| ||||||||||||||||||||| || |||||||||||||||||||| Sbjct 54 GACTTTGTAGGATACCCTCGCTTTCCTGCTTCTGTTGAGTTTATTGCTGCCGTC 1 >seq17052 Length=61 Score = 78.8 bits (86), Expect = 3e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 836 CCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTCTCACTGCCGAGGGT 895 ||||||||| | ||||||||||| |||||| |||| ||||||||||| ||||||||||| Sbjct 1 CCCAATGCTTTGCGTGACTATTTTCGTGATTTTGGTCGTATGGTTCTTGCTGCCGAGGGT 60 Query 896 C 896 | Sbjct 61 C 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17408383836135