Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq110700 850 0.0 seq27462 719 0.0 seq14883 677 0.0 seq85621 223 1e-54 seq46459 217 5e-53 seq43371 199 1e-47 seq84427 192 2e-45 >seq110700 Length=1315 Score = 850 bits (942), Expect = 0.0 Identities = 471/471 (100%), Gaps = 0/471 (0%) Strand=Plus/Plus Query 1 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 184 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAA 243 Query 61 AAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 244 AAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGAC 303 Query 121 TGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 TGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTT 363 Query 181 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 423 Query 241 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 424 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 483 Query 301 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 484 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 543 Query 361 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 603 Query 421 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGG 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGG 654 Score = 524 bits (580), Expect = 3e-145 Identities = 292/293 (99%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 637 CTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAAT 696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1023 CTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAAT 1082 Query 697 TTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGT 756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1083 TTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGT 1142 Query 757 TTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGC 816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 TTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGC 1202 Query 817 GTCAAAAATTACGTGCGGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGC 876 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1203 GTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGC 1262 Query 877 TCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCG 929 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1263 TCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCG 1315 Score = 331 bits (366), Expect = 3e-87 Identities = 183/183 (100%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 5204 TACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAG 5263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAG 60 Query 5264 AGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGT 5323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGT 120 Query 5324 GACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCT 5383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCT 180 Query 5384 GCA 5386 ||| Sbjct 181 GCA 183 >seq27462 Length=653 Score = 719 bits (796), Expect = 0.0 Identities = 398/398 (100%), Gaps = 0/398 (0%) Strand=Plus/Plus Query 3470 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 3529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 GTCGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGC 315 Query 3530 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTC 3589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 316 TTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTC 375 Query 3590 CAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGG 3649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 376 CAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGG 435 Query 3650 TCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 3709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 TCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 495 Query 3710 CTTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGC 3769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 CTTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGC 555 Query 3770 AAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGG 3829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 556 AAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGG 615 Query 3830 TATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCT 3867 |||||||||||||||||||||||||||||||||||||| Sbjct 616 TATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCT 653 Score = 347 bits (384), Expect = 4e-92 Identities = 192/192 (100%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 3215 TTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAA 3274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAA 60 Query 3275 GGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGG 3334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGG 120 Query 3335 TGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTAC 3394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTAC 180 Query 3395 TAAAATGCAACT 3406 |||||||||||| Sbjct 181 TAAAATGCAACT 192 >seq14883 Length=375 Score = 677 bits (750), Expect = 0.0 Identities = 375/375 (100%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 2017 TTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGT 2076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 375 TTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGT 316 Query 2077 TTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTGA 2136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 TTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTGA 256 Query 2137 TTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCA 2196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 TTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCA 196 Query 2197 GTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGAC 2256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195 GTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGAC 136 Query 2257 CACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAA 2316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 CACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAACGCCGAA 76 Query 2317 GCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTT 2376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75 GCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTT 16 Query 2377 CTGCTTAGGAGTTTA 2391 ||||||||||||||| Sbjct 15 CTGCTTAGGAGTTTA 1 >seq85621 Length=123 Score = 223 bits (246), Expect = 1e-54 Identities = 123/123 (100%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 973 GCTTCGGCCCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTAT 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GCTTCGGCCCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTAT 64 Query 1033 GCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCAT 1092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 GCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCAT 4 Query 1093 TTC 1095 ||| Sbjct 3 TTC 1 >seq46459 Length=120 Score = 217 bits (240), Expect = 5e-53 Identities = 120/120 (100%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1452 AGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGA 1511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGA 60 Query 1512 CTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTA 1571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTA 120 >seq43371 Length=110 Score = 199 bits (220), Expect = 1e-47 Identities = 110/110 (100%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4347 AAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAA 4406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 110 AAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAA 51 Query 4407 CGCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGG 4456 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50 CGCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGG 1 >seq84427 Length=106 Score = 192 bits (212), Expect = 2e-45 Identities = 106/106 (100%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 3911 GAAATAACCGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGG 3970 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GAAATAACCGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGG 60 Query 3971 AGGCTTTTTTATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCT 4016 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGGCTTTTTTATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17102373720715