Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_001730.1 Length=6089 Score E Sequences producing significant alignments: (Bits) Value seq110700 170 7e-39 seq27462 78.8 4e-11 >seq110700 Length=1315 Score = 170 bits (188), Expect = 7e-39 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 2743 CTTATTATGTTCATCCCGTCAACATTCAGACAGCATGCCTCGTTATGGAAGGCGCGGAGT 2802 |||||||||||||||||||||||||||| || || || ||| | ||||||||||| || | Sbjct 1023 CTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAAT 1082 Query 2803 TTAGCGAAAACATTATTAATGGCGTCGAGCGCCCGGTTAACGCCGCTGAGCTCTTCGCGT 2862 ||| |||||||||||||||||||||||||| |||||||| |||||||| | ||||||| Sbjct 1083 TTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGT 1142 Query 2863 ACACCCTGCGTATTAAGGCAGGATTCAAAGAAACTGTAATTGATGCCGAAGAGAATGCTC 2922 ||| ||||| | |||||| || || | | | ||| || ||||| || | | Sbjct 1143 TTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGC 1202 Query 2923 GTCAGAAATTACGCGCA 2939 |||| |||||||| ||| Sbjct 1203 GTCAAAAATTACGTGCA 1219 >seq27462 Length=653 Score = 78.8 bits (86), Expect = 4e-11 Identities = 104/143 (73%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 5465 AGGAAAGGCAACCCGTGATTACTTGGCAGCGGCTTTCCCTGAGCTCAACCCGTGGGAGCG 5524 |||||||| || |||||||| | || || || || |||||||| || | |||||||| Sbjct 55 AGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCG 114 Query 5525 TGCTGGAGCTGGTGCTTCCACTGCCGG---GTTAGAGTCTTCTGCTCAGAATCAACAAAA 5581 |||||| |||| ||||||| |||| || | | || | | ||||| ||||| Sbjct 115 TGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAAT---CAAAA 171 Query 5582 AGAGATGCTTAAAATGCAACTGG 5604 |||| | |||||||||||||| Sbjct 172 AGAGCTTACTAAAATGCAACTGG 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19345368412492