Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq203529 594 2e-166 seq168545 102 3e-18 seq168094 102 3e-18 seq124466 102 3e-18 seq24758 98.7 3e-17 seq61326 95.1 4e-16 seq196280 84.2 8e-13 >seq203529 Length=6087 Score = 594 bits (658), Expect = 2e-166 Identities = 699/940 (74%), Gaps = 23/940 (2%) Strand=Plus/Plus Query 1262 CTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGCTGCCCAAGAAA 1321 ||||| ||||||||||||||| ||||| |||||||| | || || |||||||| Sbjct 1 CTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAG 60 Query 1322 ATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAATGAGTCACCTC 1381 | || | ||||| ||| ||||||||||| ||||| ||| |||||||| | || Sbjct 61 CTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTG 120 Query 1382 TCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCCCGTTCAACAAC 1441 || |||| |||||||||| ||| | |||| ||||||| ||| ||||||||| | Sbjct 121 TCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAG 180 Query 1442 ATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGAAATCTGTCGCC 1501 || |||||||||||||| || | |||| | |||||||||||| ||| |||| ||| Sbjct 181 ATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCC 240 Query 1502 GACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGCAATTTGACC 1561 |||||||||| |||||||||||||||||| |||||||| ||||| |||||| || || Sbjct 241 GACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGA-- 298 Query 1562 CGTCAAA----TCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATGACAACGAAATT 1617 | ||| | || || |||||||||||||||||||||||||| ||||| ||| || Sbjct 299 --TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTT 356 Query 1618 AACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCAGGAATTACTGC 1677 |||| | ||||||||||||||| | ||||| || |||||| |||||||||||| | Sbjct 357 AACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTAC 416 Query 1678 TACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAAATTCAATCTG 1737 | || ||||||||||||||||||||||||||||| ||||||||| |||||| | || Sbjct 417 TGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGACCTA 476 Query 1738 AACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACCTGAACG-TACT 1796 ||| | ||||||||||||||||| || |||||||||||||| || |||| | || Sbjct 477 TCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACGATTCT 535 Query 1797 GGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGTGCTCTCCTCAA 1856 | |||| |||||||| | || ||||| || | || |||||||| || | || |||| Sbjct 536 GTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAA 595 Query 1857 GGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATGCTTGACTTATT 1916 ||||||||| | || || |||||| || ||||||| | | || | ||||| | || Sbjct 596 GGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTT 655 Query 1917 AAATGAACGTGGACTATTATC-----CACA---TCAACAACCAACCCAAAAGGAAATACA 1968 ||| || |||||| || |||| | | | |||||| | || ||| || | | Sbjct 656 AAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAATAGGTAAGAAA 713 Query 1969 AAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGCATCTATCAAGC 2025 |||| | || ||| | || ||| || ||| | || ||||| |||| Sbjct 714 TCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGC 773 Query 2026 TCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTTCTTAACCCGTG 2085 ||||||||||||| | || |||| | |||||||| || |||||||| | || || Sbjct 774 TCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTA 833 Query 2086 ACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGAGGCCTGCGTAT 2145 || || |||||||| ||||||||||| |||||||| ||| ||||||| ||||| | Sbjct 834 ACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTT 893 Query 2146 ATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGC 2185 ||||||| |||||||||| |||||||||||||||||||| Sbjct 894 ATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGC 933 Score = 176 bits (194), Expect = 2e-40 Identities = 361/527 (69%), Gaps = 31/527 (6%) Strand=Plus/Plus Query 4417 TTCCCTTAATCAGGTAAACAAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTC 4475 ||| || |||||||| | || || | | |||||| || ||||| | |||| ||| Sbjct 4131 TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT- 4189 Query 4476 TCTATGTTTGGTGCAATCGCTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAAC 4535 |||||||||||| || ||||||||||| || || |||||||||| || ||| Sbjct 4190 --TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCT 4247 Query 4536 AAAGCCTTTGGGGGCGGTCAATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCT 4595 ||| ||||| ||||||||| ||| |||| |||| ||||||||||||| || ||| Sbjct 4248 AAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCT 4307 Query 4596 TC---TGACAATAACGTA---ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAA 4649 | | |||||| ||| || || |||||||||||| ||||| || |||||| Sbjct 4308 ACCGATAACAATACTGTAGGCATGGG------TGATGCTGGTATTAAATCTGCCATTCAA 4361 Query 4650 GGCTCTAATCCACCCAATGGCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCT 4709 ||||||||| || || | | || | || | | | |||| || | | | ||| Sbjct 4362 GGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCT 4421 Query 4710 GACACTGGCAAA-GACGCCCT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAAT 4757 | |||| ||| ||| | | | | | | || ||||| ||| ||| | || Sbjct 4422 AAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGAT 4481 Query 4758 AAACTTATGGAAAAAATCGGACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACA 4814 || | | || | ||||| | || |||| ||||||||||| ||||| || Sbjct 4482 AAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACT 4541 Query 4815 AAGGATTATCTTGCTTCTGCATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGT 4874 |||||||||||| ||||||| || || || || | ||||| |||||||| |||| | Sbjct 4542 CGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGAT 4601 Query 4875 GCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCCAAAACCAAAAAGA 4921 ||||| |||||||| ||||||||||| || || | || |||||||| Sbjct 4602 GCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGA 4648 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 4740 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 4799 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 4800 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 4859 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 4860 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 4919 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 4920 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 4969 Score = 150 bits (166), Expect = 6e-33 Identities = 379/561 (68%), Gaps = 20/561 (4%) Strand=Plus/Plus Query 3275 TGGGCCTCTGGCTATGACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGT 3334 ||||| ||||||||||| || || || ||||||||| | || ||||| ||||| || ||| Sbjct 2703 TGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGT 2762 Query 3335 CGCGTCCAACAAACATTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTC 3394 || || ||||| || | || || || || || |||| ||| ||||| || ||| Sbjct 2763 CGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACT 2822 Query 3395 ATTATGACTCTCGCCGTTACTCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATC 3452 || | ||||| || || ||| || || |||||| | ||| ||||| || || | Sbjct 2823 ATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACC 2880 Query 3453 TTGTCGGTAAAGAATCTTTAACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCT 3511 || || ||||| |||| || |||||||| | || ||||||||| | | |||||| Sbjct 2881 TTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC- 2939 Query 3512 AACCTGCCTCCGCGCGAAGTATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT 3571 ||| |||| ||||| ||| | || | ||||| | |||| | || | || || || Sbjct 2940 AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCT 2996 Query 3572 ---AAGTTCAAAATTGCCGAGGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCA 3625 ||||| || ||||| ||||| || |||||||| | || |||| | | || | Sbjct 2997 AAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCC 3055 Query 3626 TTCCCTTATAACGCACTTGACGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTT 3684 | ||||| || ||||| ||||| || ||| | || | | ||| ||| ||| || Sbjct 3056 T--GCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTT 3112 Query 3685 AAAACAACGTGTCCTAGTTAACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACT 3744 || |||| || || || | || | || ||| | || ||||| | || | Sbjct 3113 GCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTT 3172 Query 3745 CGCACACTGGAATATGCAAACTAAATTTAATACTACCGTCTATAGACATATGCCTACGAC 3804 || ||||||| || |||||||||| ||||| ||| | || |||| || || Sbjct 3173 GTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCAC 3232 Query 3805 TCGTGATTCAATCATGACGTC 3825 ||| |||||||||||||| || Sbjct 3233 TCGCGATTCAATCATGACTTC 3253 Score = 127 bits (140), Expect = 7e-26 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 5883 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 5942 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 5943 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 6002 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 6003 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 6062 Query 833 AATGCTCTCCGTGACTATTTCCGTG 857 |||||| | ||||||||||| |||| Sbjct 6063 AATGCTTTGCGTGACTATTTTCGTG 6087 Score = 100 bits (110), Expect = 1e-17 Identities = 114/151 (75%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 2464 TAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGCTTCGG 2523 |||||| ||||| || |||||||| || || |||||| |||| | ||||||||||| Sbjct 1453 TAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAAT--TGCAGGGGCTTCGG 1510 Query 2524 CCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATTCCTAA 2583 ||||| || || |||||| | |||||||| |||||||| ||| || || || || | Sbjct 1511 CCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCA 1569 Query 2584 CGACCTTTCTCACCTCGTCTTCGAGGCTGGT 2614 |||||||| || || | |||| |||||| Sbjct 1570 TGACCTTTCCCATCTTGGCTTCCTTGCTGGT 1600 Score = 95.1 bits (104), Expect = 4e-16 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 3110 ACGTCTATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAA 3169 || |||||||| |||||||| |||||||||||||||||||| ||||| || | |||||| Sbjct 2375 ACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAA 2434 Query 3170 CGTGACTACTTCATG 3184 ||||| ||||||||| Sbjct 2435 CGTGATTACTTCATG 2449 >seq168545 Length=61 Score = 102 bits (112), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2166 GGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2224 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGCGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq168094 Length=61 Score = 102 bits (112), Expect = 3e-18 Identities = 58/59 (98%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2166 GGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGT 2224 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3 GGATACCCTCGCTTTCCTGCTCCTGTTGTGTTTATTGCTGCCGTCATTGCTTATTATGT 61 >seq124466 Length=61 Score = 102 bits (112), Expect = 3e-18 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2156 GGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGC 2215 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 GGACTTTGTAGGATACCCTCGCTTTCCTGCCCCTGTTGAGTTTATTGCTGCCGTCATTGC 60 Query 2216 T 2216 | Sbjct 61 T 61 >seq24758 Length=61 Score = 98.7 bits (108), Expect = 3e-17 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2181 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACAT 2239 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 1 CCTGCTCCTGTTGAGTTTATTGCTGCCGTCCTTGCTTATTATGTTCATCCCGTCAACAT 59 >seq61326 Length=87 Score = 95.1 bits (104), Expect = 4e-16 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 2212 TTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCTTATTATGGAAGGCGCCG 2271 |||||||||||||||||||||| ||||| || || || ||||| || ||||||||||| | Sbjct 1 TTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTG 60 Query 2272 AGTTCACCGAAAATATTATCAATGG 2296 | || || ||||| ||||| ||||| Sbjct 61 AATTTACGGAAAACATTATTAATGG 85 >seq196280 Length=61 Score = 84.2 bits (92), Expect = 8e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 828 ATCCCAATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGG 887 ||||||||||| | ||||||||||| |||| |||||||||||||||||| ||||||||| Sbjct 1 ATCCCAATGCTTTGCGTGACTATTTTCGTGCTATTGGTCGTATGGTTCTTGCTGCCGAGG 60 Query 888 G 888 | Sbjct 61 G 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17404182941220