Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= NC_007821.1 Length=6068 Score E Sequences producing significant alignments: (Bits) Value seq2969 832 0.0 >seq2969 Length=5468 Score = 832 bits (922), Expect = 0.0 Identities = 1220/1714 (71%), Gaps = 74/1714 (4%) Strand=Plus/Minus Query 2718 GGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTT 2777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5468 GGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTT 5409 Query 2778 CATCCCGTCAACATTCAGACGGCCTGCCTCATCATGGAAGGCGCTGAGTTTACGGAAAAC 2837 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct 5408 CATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAAC 5349 Query 2838 ATTGTTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAGCTCTTCGCGTACACCTTGCGT 2897 ||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||||| Sbjct 5348 ATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGT 5289 Query 2898 GTTAAGGCCGGATTCAAAGAAACGGTT-CTGAGCGCTGAAGAGAATGCTCGTCAGAAACT 2956 || || ||| || || || |||| ||| ||||| || | ||||| ||| | Sbjct 5288 GTACGCGCAGGAAACACTGACGTTCTTACTGA-CGCAGAAGAAAACGTGCGTCAAAAATT 5230 Query 2957 TCGTGCAAGTGGAGTAATGTAATATG--------AAGAAAGCTC-GTCGTTC-CCCTTCT 3006 |||||| ||||| ||||||| | || || | || | || || |||| | Sbjct 5229 ACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGT 5170 Query 3007 CGT---------------------------AAG---AAAGGCGCTCGTCTCTGGTATGTA 3036 ||| ||| |||||||||||||| ||||||||| Sbjct 5169 CGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTA 5110 Query 3037 GGCGGTTCTCAATTTTAATTAACGGGGCTTCGGCCCCTA---TAAGGATTCTTAAATGTC 3093 || ||| ||||||||||| ||||||||||||||| | ||||| | | |||| Sbjct 5109 GGTGGTCAACAATTTTAATTGCAGGGGCTTCGGCCCCTTACTTGAGGATAAATTA-TGTC 5051 Query 3094 AAACGTGCAAACTTCCGCTGAACGTATTCCTCACGACCTTTCTCATCTGGTTTTTGATGC 3153 || | |||||| ||| || ||||| || || |||||||| ||||| | || ||| Sbjct 5050 TAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGC 4991 Query 3154 AGGCAAAATTGGTCGTTTAAAGGTTGTTTCTTGGACTCCTGTTGTTGCAGGTGATTCTTT 3213 || | ||||||||| | | |||| ||||| ||| | || || || || || Sbjct 4990 TGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTT 4931 Query 3214 TGAGCTTGATATGATTGGCGCTATTCGCCTTTCCCCGCTTCGTCGTGGCCTTGCTGTTGA 3273 ||| | || |||||||| | || ||||| || | ||||||||||||||| |||| Sbjct 4930 CGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGA 4871 Query 3274 CTCTCGTGTTGACCTGTTCACGTTTTATGTCCCTCATCGTCATGTATATGGTGAGCAGTG 3333 |||| ||| ||| | || || |||||||||||||||||||| || |||||||| ||||| Sbjct 4870 CTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTG 4811 Query 3334 GATTGATTTTATGAAGCAAGGTGTTGATGCTGCTCCTTTGGCCCCTGTTCAGTGCTCTCG 3393 |||| | || |||||| | |||||| |||| ||||| | | ||||| | | || Sbjct 4810 GATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAA---CACTAC 4754 Query 3394 CGGTTGGGATAGTGCTCAG------TATCTTGCTACTATTCCGTCTAGTAACTTAAAGGT 3447 |||| ||| || || | ||||| || ||| || || | || | Sbjct 4753 TGGTT---ATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAAT 4697 Query 3448 TCCTAAG--TTTCTTCATCAAGGTTACCTGAACATTTACAATAATTACTTTAAAGCTCCG 3505 |||||| ||| || ||| ||||| |||| || || || || || |||||||| ||| Sbjct 4696 CCCTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCG 4639 Query 3506 TGGATGGATGACCTGACTTATGCCAACCCGTCTAATATGGAGGGTGAAGATGTTCGTTTT 3565 |||||| ||||| || | || ||||| | | | | || |||| ||||| | Sbjct 4638 TGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTAT 4579 Query 3566 GGTGTTCGTGCATGTAACTTGAAAACTATTTGGACTGCTCCGCTTCCTCCGGATACTGAA 3625 ||| | ||| || | | |||| ||||||||||||||||||||||| || ||||| Sbjct 4578 GGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAG 4519 Query 3626 ACCTCTCATTCTATGGAGACTGAAACCAACTCCATTGACATTATGGGTTTGCAGGCCGCT 3685 |||| ||| |||| |||| || ||||||||||||||| |||| || ||| Sbjct 4518 CTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCT 4459 Query 3686 TATGCTCAATTACATACTGAGCAGGAGCGTGATTACTTCATGACTCGTTATCGTGATATT 3745 |||||| | || |||||||| || || ||||||||||||||| ||||| | |||| || Sbjct 4458 TATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTT 4399 Query 3746 GTTAACGAATTTGGAGGTAGTACTTCTTATGATGCGGATAATCGTCCTTTGCTTGTTATG 3805 || ||||||||||| || |||||||| || || || |||||||| ||||| ||| Sbjct 4398 ATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATG 4339 Query 3806 CATTCTGAGTTCTGGGCCTCAGGCTATGATGTTGACGGCACCGACCAAAGCTCTCTCGGT 3865 | ||| | ||||||| || |||||||||||||| || || ||||||| || | || Sbjct 4338 CGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGC 4279 Query 3866 CAGTTCTCCGGTCGTGTCCAGCAGACGTTTAAGCATTCAGTACCGCGATTCTTCTGCCCT 3925 ||||| || |||||||| || ||||| | ||| ||||| || ||||| ||||| ||| Sbjct 4278 CAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCT 4219 Query 3926 GAGCATGGCACTATGTTCACACTCGCATTGGTCCGCTTCCCGCCGACTC--ATGAAATGG 3983 ||||||||||||||||| || || || | || || || ||||| ||| | ||| | Sbjct 4218 GAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--G 4161 Query 3984 AGATGCATTACTTAGTTGGTAAAGAAGATTTGACTTATACTGATTTGGCTTGTGACCCTG 4043 |||| || ||| | | ||||| | |||||||||||| ||| | ||| | ||||||| Sbjct 4160 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 4101 Query 4044 CTTTG-ATGGCTAACTTGCCTCCTCGTGAGGTTAATATGTCTCAGTTCTTCCATTCTGGA 4102 |||| ||||| |||||||| || ||||| || |||| | | |||| |||||| Sbjct 4100 TTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 4042 Query 4103 AGTGCTAGTGCTAAGTTTAAGATCGCTGAAGGTCAGTGGTATCG-CATGCAGCCTGATCG 4161 | | | ||||||||||| ||||| |||||||||||||| |||| |||| ||| Sbjct 4041 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGC-GCCT--TCG 3985 Query 4162 --CGTTGCATTGCCGTATAACTATCTTGATGGTTTTCCGTTCTATAGCGCGATTCCGTCT 4219 ||| | | ||| || |||||| || || || ||| | | || ||| Sbjct 3984 TATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATTCAGGAACCGCCTTCT 3925 Query 4220 GATGATATTAAGCAGCGCGTTCTGGTTAATACTGATAACTACGATGAGGTTTTCCAGTCT 4279 | |||| | | | ||||| || || || | || || || ||||||||| Sbjct 3924 GGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCC 3865 Query 4280 ATGCAGCTTGCGCACTGGAATATGCAGACTAAGTTTAATTGCACCATTTATCGTAATATG 4339 | ||| | ||| ||||||| ||| ||| |||||| ||| ||||||| ||| || Sbjct 3864 GTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTG 3805 Query 4340 CCGACCACTCGCGACTCTATTATGACCTCTTGAT 4373 |||||||||||||| || || ||||| || |||| Sbjct 3804 CCGACCACTCGCGATTCAATCATGACTTCGTGAT 3771 Score = 288 bits (318), Expect = 4e-74 Identities = 195/219 (89%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 2581 TTCAGGCTTCCGCTGTTCTGGATATTACCGAGGAGGATTTTGATTTCCTGACTGGTGATA 2640 |||||||||| || ||| ||||| | ||||| || ||||| ||||| ||||| || | | Sbjct 219 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACA 160 Query 2641 AAATTTGGATTGCTACTGACCGCAACCGTGCGCGTCGCTGTGTTGAGGCTTGTGTTTATG 2700 || |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||| Sbjct 159 AAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATG 100 Query 2701 GAACACTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 2760 | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 99 GTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG 40 Query 2761 TCATTGCTTATTATGTTCATCCCGTCAACATTCAGACGG 2799 |||||||||||||||||||||||||||||||||| |||| Sbjct 39 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGG 1 Score = 165 bits (182), Expect = 3e-37 Identities = 278/398 (70%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 1293 GGCTGGTTTTTCGTATTTGATACGTTGACACTTGCTGATGATCGTTTGCAGGCTTTTAAT 1352 || |||||| |||| ||||| || | || | ||||| || || || |||| ||| || Sbjct 1493 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 1434 Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412 || || ||||||||| | ||||| ||||| | | ||||||| ||||| || Sbjct 1433 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 1374 Query 1413 GAAGGTCGTTCGGTTAAGGATTCCTACAACGATTGCTATCGCTATCTTTGTGTGCCGGAG 1472 || ||||| || ||| ||||| || ||| ||||||| ||| |||||||||| ||| Sbjct 1373 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 1314 Query 1473 TTTGGAGGTCAGC--ACGGTCGTCTTCATTGGCATGTTGTGCATATGGTGCGGACTCTTC 1530 | ||| |||| | || |||||||||| |||| ||||| | ||||||| |||| Sbjct 1313 TATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTC 1256 Query 1531 CTTTGGGAAGTTACGACCCTAATTTCGGTCGCAAGGTACGTAATTATCGCCAGATTAACT 1590 || || || ||||||||||| ||||| |||||| ||| |||||| |||| | Sbjct 1255 CTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAG-TTAAAT 1197 Query 1591 CG-TTCCGTGGCATGTGGCCTTATGGCTTCACGCAACCGATAGCTGTACGCTATCAACAT 1649 | || | | |||||||||||| | || || || || || ||||| || Sbjct 1196 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 1137 Query 1650 GATGCTTATTCTCGCAAAGGTTGGTTGTGGCCTGTTGA 1687 || |||| ||| || |||||||||||||||||||| Sbjct 1136 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGA 1099 Score = 156 bits (172), Expect = 2e-34 Identities = 282/407 (69%), Gaps = 18/407 (4%) Strand=Plus/Minus Query 5443 AAGGACAAGCAACCCGTGATTACTTGGCTGCGGCCTTCCCTGAGCTCAATGCATGGGAAC 5502 ||||| | | || |||||||| | ||||| || || |||||||| ||||| ||||| | Sbjct 2788 AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC 2729 Query 5503 GTGCTGGAGCTGGTGCTTCCGGTGCCGGATTGGAGTCTTCCGGCC---AGAATCAGCAAA 5559 ||||||| |||| ||||||| ||| || ||| |||| ||||||| || Sbjct 2728 GTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCA---AA 2672 Query 5560 AGGAGTTGATGCGTATGCAGCTGGATACTCAGAAGGATATTGCTAAGATGCAAATGCATA 5619 | ||| | | ||||| ||||| | |||||| || ||||| ||||||||| | | Sbjct 2671 AAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGA 2612 Query 5620 ATAATTTGCAGATTGCTGGTATTCAGTCCGCTACTTCTCGCGAGAATACGAAGGATTCAG 5679 | | |||||||||| |||||||| || ||||| ||| |||||||||| || | Sbjct 2611 CTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCAGG 2552 Query 5680 TTTATGCTCAGAATGAGATGCTTAAATTTAATCAACAGGAGTCACAGGCACGCGTTGAGT 5739 | ||||| || |||||||||||| | | | || ||||||| || ||||||| || Sbjct 2551 TATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGT 2492 Query 5740 CTATCCTCGCCAACACTGACCTTAC--GGCTA-AACAGGCTGCCCATGAAATTATGAG-- 5794 |||| | | ||||| | ||| | || | | |||| | || || |||||| | Sbjct 2491 CTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCC---GAGATTATGCGCC 2435 Query 5795 -AATGGCCCTTACTCGTGCTCAGGAGACTGGTCAGCATTTAACTAAT 5840 |||| ||||||| ||||| | |||||||| |||| || ||| Sbjct 2434 AAATG---CTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAAT 2391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19301345075584