Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moesziomyces_20antarcticus_20[genbank_20GCA_5F000747765.1_202014-08- 21] 197 sequences; 18,111,965 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq179 199 1e-47 seq184 194 6e-46 seq197 167 8e-38 >seq179 Length=404810 Score = 199 bits (220), Expect = 1e-47 Identities = 140/160 (88%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 4567 GGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATA 4626 || |||||| || ||||||||||||| ||||||| |||||||| ||||||||| ||| Sbjct 60406 GGGTTATCGGGTTGGACACTCTCACGTGAGCTGACGTTCGATTAGATGCGTTTTATTATA 60347 Query 4627 ATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGG 4686 |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct 60346 CTCCCCATGCTTTGCGTGATTATTTTCGTGATATTGGTCGTATGGTTCTTGGTGCCGTGG 60287 Query 4687 GTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTA 4726 || | ||||||||||||| ||||| |||||||||||||| Sbjct 60286 GTTGTTAGGCTAATGATTCGCACGCGGACTGCTATCAGTA 60247 >seq184 Length=507195 Score = 194 bits (214), Expect = 6e-46 Identities = 163/200 (82%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 1796 CAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTT 1855 ||| | ||| ||||||| ||| |||||||| | | || |||||| |||||||||| Sbjct 36212 CAAAACACCCATAAACACTCTAGGCCGCGTTCATGCGCGCCGAAGCATGCCACTATGTTT 36153 Query 1856 ACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCT 1915 || || |||||||||||||||||| || ||||||| |||| ||||||||||||||||||| Sbjct 36152 ACGCTGGCGCTTGTTCGTTTTCCGTCTTCTGCGACAAAAGCGATTCAGTACCTTAACGCT 36093 Query 1916 AAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGCAACTTGCCG 1975 ||||||| ||| ||||| |||| |||||||| ||||||||||||||||| ||| || Sbjct 36092 AAAGGTGTTTTTTTTTATATAGATAGTGCTGGCGTCCCTGTTTTGTATGGCATATTGGCG 36033 Query 1976 CCGCGTGAAATTTCTATGAA 1995 || ||| | ||||| |||| Sbjct 36032 ACGTGTGTACTTTCTCTGAA 36013 >seq197 Length=2397122 Score = 167 bits (184), Expect = 8e-38 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 4527 CGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTTTTTGACACT 4586 |||||||||| | || | |||| ||| |||||||||| ||||||| |||| ||||| Sbjct 690818 CGTTTGATGATACCCATTCATCAGGTTCAAGCTGATGGTTTGTTTATCTTTTTAGACACA 690877 Query 4587 CTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGAC 4646 ||||||||||||| | ||||||||||||||||||||||| |||||||||| |||||| Sbjct 690878 ATCACGTTGGCTGAAAATTGATTAGAGGCGTTTTATGATAATACCAATGCTTTTCGTGAC 690937 Query 4647 TATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCA 4706 || | |||||||||| || |||| | | ||||| ||| || | |||| || Sbjct 690938 TAGTATCGTGATATTAATCTTATGATGCGTGCTGACGATGGCCTAGAGGCCCCCCCCCCA 690997 Query 4707 CACGCCGACTGCTATCAGTATTTTTGTGTGCC 4738 ||| ||| |||| | | |||||||||||||| Sbjct 690998 CACACCGGCTGCCCTTATTATTTTTGTGTGCC 691029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17123163104855