Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq99038 242 2e-60 seq69202 87.8 1e-13 >seq99038 Length=831 Score = 242 bits (268), Expect = 2e-60 Identities = 409/579 (71%), Gaps = 20/579 (3%) Strand=Plus/Minus Query 6924 ACGGTGTGCACCAGCCCCGAG-TCCGCATCCACACCAATGTGCGCTTTCATGCCGAAATG 6982 |||||||| ||||| |||||| || || ||||| || || || ||||| ||||||| Sbjct 819 ACGGTGTGTACCAGGCCCGAGGTCGGCGTCCACTCCGATATGGCACTTCATACCGAAATA 760 Query 6983 CCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCACGCTTGCCGCTGCCA-TTCT 7041 |||||| | || || | | || | |||||| ||||| |||| |||||||| |||| Sbjct 759 CCACTGCTGCCCCTTGCGGCTTTGCTTCATCTCCGGGTCGCGCTCGCCGCTGCGTGTTCT 700 Query 7042 TGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTCGACCACCGTGCACGTCTTTGAGCAGG 7101 ||||||| |||||||| || |||| | |||||| |||||||||| |||| ||||| Sbjct 699 TGGTCGAGCTGGGCGCTGCGATCAAGGTGGCGTCCACCACCGTGCCGCTCTT-GAGCATC 641 Query 7102 TAGCCCTTCGCACTGAGTTGCGCGTTGACGGTCTGCAGAAATTGCTCGGCTAACTGGTGT 7161 |||||| || ||||| | |||||||||||||||| |||| | || | || ||| Sbjct 640 ACGCCCTTGGCGCTGAGCAGATCGTTGACGGTCTGCAGGT-TTGCGCCGCCAGCTTGTGC 582 Query 7162 CGCTCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAGTCGGCTTAT---- 7217 |||||| | |||||| || ||||| || || | ||| ||||| || | || Sbjct 581 TTCTCCAGTACGTGCCGGAACCGCAGGATCGTGCTCTCGTCGGGCAGCCGT-TCATCCCA 523 Query 7218 GCCTCCCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTCTTCCATCGC 7277 |||| | ||||| ||||| | || ||| |||| ||||| |||||| || ||||| || Sbjct 522 GCCTTCGAGCCCTGCGAACTCGCGGAACACAGGCATGTCGTGCAGCGCTTCCTCCATGGC 463 Query 7278 CACGTCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGTTTCGACTGG 7337 | ||| ||||| ||||||| ||||||| || |||||||||||||| || ||| || Sbjct 462 CGGGTCGCTCAGCGCGAACCACTGCTGCATGAAATGGATGCGCAGCATGGTCTCGCACGG 403 Query 7338 AAACGGCTTCCGACCCG-TCGCCTTGACCGGCGCATGCGGCGCTATCAACGCCAAAAAAC 7396 ||||| || |||| | ||||| ||| | ||||| | || | | | | Sbjct 402 GAACGGAGGACGCCCCGCTTGCCTT---CGGTAGGTACGGCGACACCAGGGTC-ACCAGT 347 Query 7397 GCCTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGCGCGTGCGTCGG 7456 | |||| ||||| || |||||||||||||| ||| || || ||||| ||| Sbjct 346 TCGGGCCATGGCACGACCTTCTCCATCTCATCCAGGAATTCCCGCCGCCGCGT---TCGC 290 Query 7457 TT-GC--TCAGGTCCAGGCCAAGGTCGCTTTGTTTCATG 7492 || || ||| ||||||| ||| | ||||||||| Sbjct 289 TTCGCCGTCATTCCCAGGCCCAGGCTGTGCTGTTTCATG 251 >seq69202 Length=582 Score = 87.8 bits (96), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 9/206 (4%) Strand=Plus/Plus Query 6812 TCGCGCTTGTCGATGCCCTGAT--AGCCGGCATCGCCGAACACGTCGGCCTCCTTGCCAT 6869 ||||||||||| ||| || | | ||||||||| | | || || |||||||| || Sbjct 348 TCGCGCTTGTCC--GCCTTGGTTTACCCGGCATCGGCCTAGACCTCACGCTCCTTGCTAT 405 Query 6870 GCACCAATGCGTTGCGCTG--GCGTCACGTCGTTGACGTTGGCGGCCGTGCCCACTACGG 6927 ||| || || || |||| ||||||||||| | ||| || | || || | | Sbjct 406 GCAGCA--GC-TTCCGCTCCTGCGTCACGTCGGCCAAGTTCGCCGTGGTCGATACCAACG 462 Query 6928 TGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCACT 6987 |||||||||| | ||| ||| |||| || |||||||||||||| | ||| ||||| Sbjct 463 TGTGCACCAGACGCGAATCCCGATCCGTCCCGATGTGCGCTTTCATCCGGAAGAACCACT 522 Query 6988 GGTTACCTTTCTTGGTCTGGTGCATC 7013 | ||||||| |||||| |||||| Sbjct 523 ACTGGCCTTTCTCGGTCTGTTGCATC 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27287940568000