Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq77338 86.0 3e-13 >seq77338 Length=471 Score = 86.0 bits (94), Expect = 3e-13 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 5037 CCTCGTATTCTTACGCTTTCAGGTCAGAAGGGTTCTATTTCTGTTGGCCAGAATGTCCCT 5096 ||||| ||||| || | || || || | |||| ||| |||||||||||||| ||||| Sbjct 110 CCTCGCATTCTCACTCAGTCCGGACAAACCGGTTATATCTCTGTTGGCCAGAACGTCCCG 169 Query 5097 TTTATTACTGGTCGTGTAACTGGTGAATCTGCCAATGTAAATAATCCATTTCAGACGGTT 5156 ||| | || ||| || ||||| ||| | || || ||||||||||| ||||| || || Sbjct 170 TTTGTCACAGGTAAGGTTACTGGCGAAGCAGCTAACGTAAATAATCCGTTTCAAACCATT 229 Query 5157 GAGCG 5161 || || Sbjct 230 GAACG 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20360510222400